fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040183 not found in 272aa AT2G44940.1 not_not 0.449086161 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60490.1     -----------MGKQINIESSATHHQDN-IVSVITATISSSSVVTSSSDSWSTSK-----
pt040183_POPTR_ MPLALARDLPIMEKHINLEIDA---QDNPLASSSTTTSTTKGNISSSSTPISCIKHQGSK
                           * *:**:* .*   *** :.*  *:* ::.. ::*** . *  *     

AT3G60490.1     --------------RSLVQDNDSGGKRRKSNVSDDN-KNPTSYRGVRMRSWGKWVSEIRE
pt040183_POPTR_ KEENSIAPRVSRKAQELQSSGNEGGKRRKTAENEKNGKHPT-YRGVRMRSWGKWVSEIRE
                              :.* ...:.******:  .:.* *:** ******************

AT3G60490.1     PRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAA
pt040183_POPTR_ PRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAA
                *******************************.*.:*****::  ** *:* *********

AT3G60490.1     TKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETV
pt040183_POPTR_ AKAAAASFTETRYCEGEGGGE---AEL----NVSNLSDSLAMDNTQESSSSPSTDSDDTL
                :*** *:  ..   : : ..*   :**    : *. *. :  .:*.*:**: . ..::*:

AT3G60490.1     FDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEEDVGFRFEEPFNWQND
pt040183_POPTR_ FDLPDLFIDGVHH-SDGFCYYSS--SWQLCA-ADTGFRLGEPFLWEY-
                ******* **: : .*.**  ..  :*** .  *.***: *** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G60490.1     - - - - - - - - - - - M G K Q I N I E S S A T H H Q D N - I V S V I T A T I S S S S V V T S S S D S W S T S K - - - - -
pt040183_POPTR_    M P L A L A R D L P I M E K H I N L E I D A - - - Q D N P L A S S S T T T S T T K G N I S S S S T P I S C I K H Q G S K
 
AT3G60490.1     - - - - - - - - - - - - - - R S L V Q D N D S G G K R R K S N V S D D N - K N P T S Y R G V R M R S W G K W V S E I R E
pt040183_POPTR_    K E E N S I A P R V S R K A Q E L Q S S G N E G G K R R K T A E N E K N G K H P T - Y R G V R M R S W G K W V S E I R E
 
AT3G60490.1     P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G N S G F L N F P E L S G L L P R P V S C S P K D I Q A A A
pt040183_POPTR_    P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E F A H E L P P P L S K S P K D I Q A A A
 
AT3G60490.1     T K A A E A T T W H K P V I D K K L A D E L S H S E L L S T A Q S S T S S S F V F S S D T S E T S S T D K E S N E E T V
pt040183_POPTR_    A K A A A A S F T E T R Y C E G E G G G E - - - A E L - - - - N V S N L S D S L A M D N T Q E S S S S P S T D S D D T L
 
AT3G60490.1     F D L P D L F T D G L M N P N D A F C L C N G T F T W Q L Y G E E D V G F R F E E P F N W Q N D
pt040183_POPTR_    F D L P D L F I D G V H H - S D G F C Y Y S S - - S W Q L C A - A D T G F R L G E P F L W E Y -
 
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