fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016119 not found in 269aa AT2G44940.1 1st_not 0.456919060 II
Pt040183 not found in 272aa AT2G44940.1 not_not 0.449086161 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G60490.1     -----------MGKQINIESSATHHQDN-IVSVITATISSSSVVTSSSDSWSTS------
pt040183_POPTR_ MPLALARDLPIMEKHINLEIDA---QDNPLASSSTTTSTTKGNISSSSTPISCI---KHQ
pt016119_POPTR_ -----------MEKHIILEIDA---QDNSLTSSSTSTTTTTTTTSSSSSSFSTTISYTDR
                           * *:* :* .*   *** :.*  *:* ::.   :*** . *        

AT3G60490.1     ----------------KRSLVQ-DNDSGGKRRKSNVSDDN-KNPTSYRGVRMRSWGKWVS
pt040183_POPTR_ GSKKEENSIA-PRVSRKAQELQSSGNEGGKRRKTAENEKNGKHPT-YRGVRMRSWGKWVS
pt016119_POPTR_ ISKKEENSIADPKGSRKSQELQ-SGNEGNKKRKTTRNENNGKHPT-YRGVRMRSWGKWVC
                                * . :* ..:.*.*:**:  .:.* *:** *************.

AT3G60490.1     EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDI
pt040183_POPTR_ EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPEFAHELPPPLSKSPKDI
pt016119_POPTR_ EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPELVDELPRPLSKSPKDI
                ***********************************.*.:*****:   ** *:* *****

AT3G60490.1     QAAATKAAEATTWHKPVIDKKLADE--LSHSELLSTAQSSTSSSFVFSSDTSETSSTDKE
pt040183_POPTR_ QAAAAKAAAASFTETRYCEGEGGGE-----AEL----NVSNLSDSLAMDNTQESSSSPST
pt016119_POPTR_ QAAAAKAAAASFPETRHCEAEAEAEADMSHAEL----NVSNLSDNLAMDNIQESSSSPST
                ****:*** *:  ..   : :   *     :**    : *. *. :  .: .*:**: . 

AT3G60490.1     SNEETVFDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEEDVGFRFEEPFNWQND
pt040183_POPTR_ DSDDTLFDLPDLFIDGV-HHSDGFCYYSS--SWQLCA-ADTGFRLGEPFLWEY-
pt016119_POPTR_ DVDDKLFDLPDLFIDGV-NHSDGFCYYSP--PWQLCS-ADTGFRLEEPFLWEY-
                . ::.:******* **: : .*.**  .   .*** .  *.***: *** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G60490.1     - - - - - - - - - - - M G K Q I N I E S S A T H H Q D N - I V S V I T A T I S S S S V V T S S S D S W S T S - - - - - -
pt040183_POPTR_    M P L A L A R D L P I M E K H I N L E I D A - - - Q D N P L A S S S T T T S T T K G N I S S S S T P I S C I - - - K H Q
pt016119_POPTR_    - - - - - - - - - - - M E K H I I L E I D A - - - Q D N S L T S S S T S T T T T T T T T S S S S S S F S T T I S Y T D R
 
AT3G60490.1     - - - - - - - - - - - - - - - - K R S L V Q - D N D S G G K R R K S N V S D D N - K N P T S Y R G V R M R S W G K W V S
pt040183_POPTR_    G S K K E E N S I A - P R V S R K A Q E L Q S S G N E G G K R R K T A E N E K N G K H P T - Y R G V R M R S W G K W V S
pt016119_POPTR_    I S K K E E N S I A D P K G S R K S Q E L Q - S G N E G N K K R K T T R N E N N G K H P T - Y R G V R M R S W G K W V C
 
AT3G60490.1     E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G N S G F L N F P E L S G L L P R P V S C S P K D I
pt040183_POPTR_    E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E F A H E L P P P L S K S P K D I
pt016119_POPTR_    E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E L V D E L P R P L S K S P K D I
 
AT3G60490.1     Q A A A T K A A E A T T W H K P V I D K K L A D E - - L S H S E L L S T A Q S S T S S S F V F S S D T S E T S S T D K E
pt040183_POPTR_    Q A A A A K A A A A S F T E T R Y C E G E G G G E - - - - - A E L - - - - N V S N L S D S L A M D N T Q E S S S S P S T
pt016119_POPTR_    Q A A A A K A A A A S F P E T R H C E A E A E A E A D M S H A E L - - - - N V S N L S D N L A M D N I Q E S S S S P S T
 
AT3G60490.1     S N E E T V F D L P D L F T D G L M N P N D A F C L C N G T F T W Q L Y G E E D V G F R F E E P F N W Q N D
pt040183_POPTR_    D S D D T L F D L P D L F I D G V - H H S D G F C Y Y S S - - S W Q L C A - A D T G F R L G E P F L W E Y -
pt016119_POPTR_    D V D D K L F D L P D L F I D G V - N H S D G F C Y Y S P - - P W Q L C S - A D T G F R L E E P F L W E Y -
 
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