fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000882 not found in 263aa AT2G44940.1 1st_not 0.430809399 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60490.1     MGKQINIESSATHHQDNIVSVITATISSSSVVTSSSDSWSTSKRSLVQD---------ND
gm000882_Glyma0 ------MESDAGENLFGTFSSSTTSITASSSSSPTSSTTTSSNSCTKHDSKISPPQNQNT
                      :**.* .:  . .*  *::*::**  :.:*.: ::*: .  :*         * 

AT3G60490.1     SGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD
gm000882_Glyma0 PNSKKRQRSDDNENKHHPSYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD
                ...*:*: . .::**: .********:*********************************

AT3G60490.1     VAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHKPVIDKKLAD--E
gm000882_Glyma0 VAALAVKGHSAFLNFPNLAQDLPRPTTTSPKDIQAAAAKAATTTFFDDEIVNHCQAEKAE
                *****:**:*.*****:*:  ****.: *********:*** :* :.. ::::  *:  *

AT3G60490.1     LSHSELLSTAQSSTSSSFVF--------------SSDTSETSSTDKESNEETVFDLPDLF
gm000882_Glyma0 QNHGE-----QQASPSTLCMMDNSTEAEQIQAEQASSTQESSSSHSTADEETLFDLPDLF
                 .*.*     *.::.*:: :              :*.*.*:**:.. ::***:*******

AT3G60490.1     TDGLMNPNDAFCLCNGTFT----WQLYGEEDVGFRFEEPFNWQND
gm000882_Glyma0 PDG----------NSGLFSYSSCWHLCA-VDSGFRLEEQFLWENF
                .**           .* *:    *:* .  * ***:** * *:*
BoxShade v3.31 C (beta, 970507) Output
AT3G60490.1     M G K Q I N I E S S A T H H Q D N I V S V I T A T I S S S S V V T S S S D S W S T S K R S L V Q D - - - - - - - - - N D
gm000882_Glyma0    - - - - - - M E S D A G E N L F G T F S S S T T S I T A S S S S S P T S S T T T S S N S C T K H D S K I S P P Q N Q N T
 
AT3G60490.1     S G G K R R K S N V S D D N K N P T S Y R G V R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D
gm000882_Glyma0    P N S K K R Q R S D D N E N K H H P S Y R G V R M R A W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D
 
AT3G60490.1     V A A L A I K G N S G F L N F P E L S G L L P R P V S C S P K D I Q A A A T K A A E A T T W H K P V I D K K L A D - - E
gm000882_Glyma0    V A A L A V K G H S A F L N F P N L A Q D L P R P T T T S P K D I Q A A A A K A A T T T F F D D E I V N H C Q A E K A E
 
AT3G60490.1     L S H S E L L S T A Q S S T S S S F V F - - - - - - - - - - - - - - S S D T S E T S S T D K E S N E E T V F D L P D L F
gm000882_Glyma0    Q N H G E - - - - - Q Q A S P S T L C M M D N S T E A E Q I Q A E Q A S S T Q E S S S S H S T A D E E T L F D L P D L F
 
AT3G60490.1     T D G L M N P N D A F C L C N G T F T - - - - W Q L Y G E E D V G F R F E E P F N W Q N D
gm000882_Glyma0    P D G - - - - - - - - - - N S G L F S Y S S C W H L C A - V D S G F R L E E Q F L W E N F
 
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