fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006797 not found in 226aa AT2G45050.1 1st_not 0.460358056 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60530.1     MDVYG-MSSP-DLLRIDDLLDFSNDEIFSSSSTVTSSAASSAASSENPFSFPSSTYTSPT
gm006797_Glyma0 MDLYGSFSTPSDCLHIDDFLDFSN---------ITTTTTDTHHHFPPPQNSPSISH-DPN
                **:** :*:* * *:***:*****         :*::::.:      * . ** :: .*.

AT3G60530.1     LLTDFTHDLCVPSDDAAHLEWLSRFVDDSFSDF----PANPLTMTVRPEISFTGK-----
gm006797_Glyma0 FFLNFP---SVPSDEAVELEWLSQFVNDEATSFHNIPPPASIGSHTTPFLSNNNRNDNNN
                :: :*.   .****:*..*****:**:*. :.*    *. .:   . * :* ..:     

AT3G60530.1     --PRSRRSRAPAPSVAGTWAPMSESELCHSVAKPKPKKVYNAESVTADGARRCTHCASEK
gm006797_Glyma0 EYPKSSSS---SPVLAG---------------KSRARR---EGSVTGDGVRRCSHCATDK
                  *:*  *   :* :**               *.:.::     ***.**.***:***::*

AT3G60530.1     TPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKE-
gm006797_Glyma0 TPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVMTQHSNSHRKVMELRRQKEL
                *********************:************:*****:****************** 

AT3G60530.1     ----QQESCVRIPPFQPQ--
gm006797_Glyma0 LRHQQQEQCYRHTHHDFKVC
                    ***.* * . .: :
BoxShade v3.31 C (beta, 970507) Output
AT3G60530.1     M D V Y G - M S S P - D L L R I D D L L D F S N D E I F S S S S T V T S S A A S S A A S S E N P F S F P S S T Y T S P T
gm006797_Glyma0    M D L Y G S F S T P S D C L H I D D F L D F S N - - - - - - - - - I T T T T T D T H H H F P P P Q N S P S I S H - D P N
 
AT3G60530.1     L L T D F T H D L C V P S D D A A H L E W L S R F V D D S F S D F - - - - P A N P L T M T V R P E I S F T G K - - - - -
gm006797_Glyma0    F F L N F P - - - S V P S D E A V E L E W L S Q F V N D E A T S F H N I P P P A S I G S H T T P F L S N N N R N D N N N
 
AT3G60530.1     - - P R S R R S R A P A P S V A G T W A P M S E S E L C H S V A K P K P K K V Y N A E S V T A D G A R R C T H C A S E K
gm006797_Glyma0    E Y P K S S S S - - - S P V L A G - - - - - - - - - - - - - - - K S R A R R - - - E G S V T G D G V R R C S H C A T D K
 
AT3G60530.1     T P Q W R T G P L G P K T L C N A C G V R Y K S G R L V P E Y R P A S S P T F V L T Q H S N S H R K V M E L R R Q K E -
gm006797_Glyma0    T P Q W R T G P L G P K T L C N A C G V R F K S G R L V P E Y R P A A S P T F V M T Q H S N S H R K V M E L R R Q K E L
 
AT3G60530.1     - - - - Q Q E S C V R I P P F Q P Q - -
gm006797_Glyma0    L R H Q Q Q E Q C Y R H T H H D F K V C
 
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