fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017520 not found in 251aa AT2G45050.1 not_not 0.526854219 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60530.1     MDVYG----MSSPDLLRIDDLLDFSNDEIFSSSSTVTS---SAASSAASSENPFSFPSST
pt017520_POPTR_ MDVYGGLSTTTAPDYFHIDDLLDFSNDDLLSSPSSSIDHHHHLPPPETSSIHHHHFPSST
                *****     ::** ::**********:::**.*:  .     ... :** : . *****

AT3G60530.1     YTS--PTLLTDFTHDLCVPSDDAAHLEWLSRFVDDSFSDFPANPLTMTVRPEISFTGKPR
pt017520_POPTR_ YINNPSSLSTDFTDHLSVPTDDVAELEWLSQFVEDSFSDFPS---IINIPTDTSFCNKSR
                * .  .:* ****..*.**:**.*.*****:**:*******:    :.: .: ** .*.*

AT3G60530.1     SRRSRAPAPSVAGTWAPMSESELCHSV-AKPKPKKVYNA--ESVTADGA-RRCTHCASEK
pt017520_POPTR_ SKRSRATA-----TTATSSSPELETAVTGKSRLKKENNGAPHSPAEEGTVRRCTHCASEK
                *:****.*     * *. *..**  :* .*.: **  *.  .* : :*: **********

AT3G60530.1     TPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKE-
pt017520_POPTR_ TPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTRHSNSHRKVLELRRQKEM
                **********************************:*******:********:******* 

AT3G60530.1     ----QQESCVRIPPFQPQ---------
pt017520_POPTR_ TVGRQQQ--------QQQHGYQGYEVC
                    **:        * *
BoxShade v3.31 C (beta, 970507) Output
AT3G60530.1     M D V Y G - - - - M S S P D L L R I D D L L D F S N D E I F S S S S T V T S - - - S A A S S A A S S E N P F S F P S S T
pt017520_POPTR_    M D V Y G G L S T T T A P D Y F H I D D L L D F S N D D L L S S P S S S I D H H H H L P P P E T S S I H H H H F P S S T
 
AT3G60530.1     Y T S - - P T L L T D F T H D L C V P S D D A A H L E W L S R F V D D S F S D F P A N P L T M T V R P E I S F T G K P R
pt017520_POPTR_    Y I N N P S S L S T D F T D H L S V P T D D V A E L E W L S Q F V E D S F S D F P S - - - I I N I P T D T S F C N K S R
 
AT3G60530.1     S R R S R A P A P S V A G T W A P M S E S E L C H S V - A K P K P K K V Y N A - - E S V T A D G A - R R C T H C A S E K
pt017520_POPTR_    S K R S R A T A - - - - - T T A T S S S P E L E T A V T G K S R L K K E N N G A P H S P A E E G T V R R C T H C A S E K
 
AT3G60530.1     T P Q W R T G P L G P K T L C N A C G V R Y K S G R L V P E Y R P A S S P T F V L T Q H S N S H R K V M E L R R Q K E -
pt017520_POPTR_    T P Q W R T G P L G P K T L C N A C G V R Y K S G R L V P E Y R P A A S P T F V L T R H S N S H R K V L E L R R Q K E M
 
AT3G60530.1     - - - - Q Q E S C V R I P P F Q P Q - - - - - - - - -
pt017520_POPTR_    T V G R Q Q Q - - - - - - - - Q Q Q H G Y Q G Y E V C
 
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