fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60580.1 VKQRMIDLNLPAPTEEDE at 269/288 in AT3G60580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040126 NNWGFIDLNLPAPVDDDD in 299/332 AT3G60580.1 1st_1st 0.384297520 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60580.1     MESYKCRVCFKSFVNGKALGGHMRSHMSN----SHEEEQRPSQLSYETESDVSSSDPKFA
pt040126_POPTR_ MEKHKCKLCFKSFSNGRALGGHMRSHMLNLPIPPKLEDQFP---------DI-EVNPEFS
                **.:**::***** **:********** *    .: *:* *         *: . :*:*:

AT3G60580.1     FTS----SVLLEDGESESESSRNVINLTRKRSKRTRKL-----------------DSFVT
pt040126_POPTR_ FAAVDAGSVVLQDRESETESSKNP---TRRRSKRTKSLLEHHHQYHQQRPRQEQENNIII
                *::    **:*:* ***:***:*    **:*****:.*                 :.:: 

AT3G60580.1     KKVK-----------TSQLGYKPESDQEPPHSSASDTTTEEDLAFCLMMLSRDKWK-KNK
pt040126_POPTR_ KKLEFKKMGTIKAAAESSWGHEPE-----PVSSISGTTTEEDVAFCLVMLSRDKWKRKEQ
                **::            *. *::**     * ** *.******:****:******** *::

AT3G60580.1     SNKEVVEEIETE------EESEGYNKINRATTKGRYKCETCGKVFKSYQALGGHRASHKK
pt040126_POPTR_ ENQEEEQELEEELAEAETDDSDEF-KSCKTKTRGKYKCETCNKVFKSYQALGGHRASHKK
                .*:*  :*:* *      ::*: : *  ::.*:*:******.******************

AT3G60580.1     NRV---SNNKTEQRSETEYDNVVVVAKRIHECPICLRVFASGQALGGHKRSH--GVGNLS
pt040126_POPTR_ LKVYTPSNEPKLERTENAGASTSLPEKKTHECPYCFRVFSSGQALGGHKRSHLIGVAASS
                 :*   **: . :*:*.   .. :  *: **** *:***:************  **.  *

AT3G60580.1     VNQQRRVHRNESVKQRMIDLNLPAPTEEDEVSVVFQ---------------
pt040126_POPTR_ STPARSSTRIGDNNWGFIDLNLPAPVDDDDISQVDQLSAVSDAEFVNYVRR
                 .  *   *  . :  :********.::*::* * *
BoxShade v3.31 C (beta, 970507) Output
AT3G60580.1     M E S Y K C R V C F K S F V N G K A L G G H M R S H M S N - - - - S H E E E Q R P S Q L S Y E T E S D V S S S D P K F A
pt040126_POPTR_    M E K H K C K L C F K S F S N G R A L G G H M R S H M L N L P I P P K L E D Q F P - - - - - - - - - D I - E V N P E F S
 
AT3G60580.1     F T S - - - - S V L L E D G E S E S E S S R N V I N L T R K R S K R T R K L - - - - - - - - - - - - - - - - - D S F V T
pt040126_POPTR_    F A A V D A G S V V L Q D R E S E T E S S K N P - - - T R R R S K R T K S L L E H H H Q Y H Q Q R P R Q E Q E N N I I I
 
AT3G60580.1     K K V K - - - - - - - - - - - T S Q L G Y K P E S D Q E P P H S S A S D T T T E E D L A F C L M M L S R D K W K - K N K
pt040126_POPTR_    K K L E F K K M G T I K A A A E S S W G H E P E - - - - - P V S S I S G T T T E E D V A F C L V M L S R D K W K R K E Q
 
AT3G60580.1     S N K E V V E E I E T E - - - - - - E E S E G Y N K I N R A T T K G R Y K C E T C G K V F K S Y Q A L G G H R A S H K K
pt040126_POPTR_    E N Q E E E Q E L E E E L A E A E T D D S D E F - K S C K T K T R G K Y K C E T C N K V F K S Y Q A L G G H R A S H K K
 
AT3G60580.1     N R V - - - S N N K T E Q R S E T E Y D N V V V V A K R I H E C P I C L R V F A S G Q A L G G H K R S H - - G V G N L S
pt040126_POPTR_    L K V Y T P S N E P K L E R T E N A G A S T S L P E K K T H E C P Y C F R V F S S G Q A L G G H K R S H L I G V A A S S
 
AT3G60580.1     V N Q Q R R V H R N E S V K Q R M I D L N L P A P T E E D E V S V V F Q - - - - - - - - - - - - - - -
pt040126_POPTR_    S T P A R S S T R I G D N N W G F I D L N L P A P V D D D D I S Q V D Q L S A V S D A E F V N Y V R R
 
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