fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60580.1 VKQRMIDLNLPAPTEEDE at 269/288 in AT3G60580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006068 VGDSLIDLNLPAPMDDDE in 354/416 AT3G60580.1 1st_1st 0.386363636 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60580.1     MESYKCRVCFKSFVNGKALGGHMRSHMSN----SHEEEQRPSQLSYETESDVSSS-----
gm006068_Glyma0 MEKHKCKLCLRSFANGRALGGHMRSHMMNLPVPPKQSELVPIQLSFEAESSPSQSSSSFY
                **.:**::*::**.**:********** *    .::.*  * ***:*:**. *.*     

AT3G60580.1     -------------DPKFAF----TSSVLLEDGESESESSRNVINLTRKRSKRTRKLDSFV
gm006068_Glyma0 GLRENPKKNFRFADPEFSFAAAETSSVILQDRESETESSRNP---TRRRSKRAWQ-----
                             **:*:*    ****:*:* ***:*****    **:****: :     

AT3G60580.1     TKKVKTSQL-------GYKPESDQE-------------PPHSSASDTTTEEDLAFCLMML
gm006068_Glyma0 -------QLGGDSGGGGVSDESEKKMMKVFDAVNKNNNESASSVSDTTTEEAVAFCLMML
                       **       * . **:::              . **.******* :*******

AT3G60580.1     SRDKWKKNKS----NK--------------------EVVEEI-ETEEESEGYNKINRATT
gm006068_Glyma0 SRDKWKENNKLLYDNKVEIAEYNDDYDDEEDEDEEEEEDEEIYESEEELKSVKKSNK--V
                ******:*:.    **                    *  *** *:*** :. :* *:  .

AT3G60580.1     KGRYKCETCGKVFKSYQALGGHRASHK---------KNRVSNNKTEQRSET-EYDNVVVV
gm006068_Glyma0 RGRYKCETCEKVFRSYQALGGHRASHKKIKLNNCENKNKNNNNNNDDEAEQLEVQHVVVV
                :******** ***:*************         **: .**:.::.:*  * ::****

AT3G60580.1     AKRIHECPICLRVFASGQALGGHKRSHGVGN--------------LSVNQQ------RRV
gm006068_Glyma0 EKKIHECPVCFRVFASGQALGGHKRTHVIGSSTAAATTTATAITTVSVRNSVATVSVRTT
                 *:*****:*:**************:* :*.              :**.:.      * .

AT3G60580.1     HRNESVKQRMIDLNLPAPTEEDE-----------------VSVVFQ--------------
gm006068_Glyma0 STARVVGDSLIDLNLPAPMDDDEEEEGNSLLNCEVLLLKLIWIFFFLGPCDPKVQKFWFG
                   . * : :******** ::**                 : :.*               

AT3G60580.1     -------------
gm006068_Glyma0 YLLAILDLFSHLG
BoxShade v3.31 C (beta, 970507) Output
AT3G60580.1     M E S Y K C R V C F K S F V N G K A L G G H M R S H M S N - - - - S H E E E Q R P S Q L S Y E T E S D V S S S - - - - -
gm006068_Glyma0    M E K H K C K L C L R S F A N G R A L G G H M R S H M M N L P V P P K Q S E L V P I Q L S F E A E S S P S Q S S S S F Y
 
AT3G60580.1     - - - - - - - - - - - - - D P K F A F - - - - T S S V L L E D G E S E S E S S R N V I N L T R K R S K R T R K L D S F V
gm006068_Glyma0    G L R E N P K K N F R F A D P E F S F A A A E T S S V I L Q D R E S E T E S S R N P - - - T R R R S K R A W Q - - - - -
 
AT3G60580.1     T K K V K T S Q L - - - - - - - G Y K P E S D Q E - - - - - - - - - - - - - P P H S S A S D T T T E E D L A F C L M M L
gm006068_Glyma0    - - - - - - - Q L G G D S G G G G V S D E S E K K M M K V F D A V N K N N N E S A S S V S D T T T E E A V A F C L M M L
 
AT3G60580.1     S R D K W K K N K S - - - - N K - - - - - - - - - - - - - - - - - - - - E V V E E I - E T E E E S E G Y N K I N R A T T
gm006068_Glyma0    S R D K W K E N N K L L Y D N K V E I A E Y N D D Y D D E E D E D E E E E E D E E I Y E S E E E L K S V K K S N K - - V
 
AT3G60580.1     K G R Y K C E T C G K V F K S Y Q A L G G H R A S H K - - - - - - - - - K N R V S N N K T E Q R S E T - E Y D N V V V V
gm006068_Glyma0    R G R Y K C E T C E K V F R S Y Q A L G G H R A S H K K I K L N N C E N K N K N N N N N N D D E A E Q L E V Q H V V V V
 
AT3G60580.1     A K R I H E C P I C L R V F A S G Q A L G G H K R S H G V G N - - - - - - - - - - - - - - L S V N Q Q - - - - - - R R V
gm006068_Glyma0    E K K I H E C P V C F R V F A S G Q A L G G H K R T H V I G S S T A A A T T T A T A I T T V S V R N S V A T V S V R T T
 
AT3G60580.1     H R N E S V K Q R M I D L N L P A P T E E D E - - - - - - - - - - - - - - - - - V S V V F Q - - - - - - - - - - - - - -
gm006068_Glyma0    S T A R V V G D S L I D L N L P A P M D D D E E E E G N S L L N C E V L L L K L I W I F F F L G P C D P K V Q K F W F G
 
AT3G60580.1     - - - - - - - - - - - - -
gm006068_Glyma0    Y L L A I L D L F S H L G
 
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