fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017143 not found in 300aa AT2G45430.1 1st_not 0.490610328 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60870.1     MDEVS---RSHTPQFLSSD---HQHYHHQNA---------GRQKRGREEEGVEPNN----
pt017143_POPTR_ MDPVSAHGRPLPPPFHTRDFHLHQFQHHQQQNSEDEQSGNGDLNRGQKREHDEINNNNNT
                ** **   *. .* * : *   **. ***:          *  :**::.*  * **    

AT3G60870.1     -IGEDLATFPSGEENIKKRRPRGRPAGSKNKPKAPIIVTRDSANAFRCHVMEITNACDVM
pt017143_POPTR_ VEGLELVPSSSGGEGEISRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIATGSDIM
                  * :*.. .** *.  .***************.***:*******:*.*****:...*:*

AT3G60870.1     ESLAVFARRRQRGVCVLTGNGAVTNVTVRQPG--GGVVSLHGRFEILSLSGSFLPPPAPP
pt017143_POPTR_ ESVSTFARRRQRGVCILSGTGTVTNVTLKQPASPGAVVTLHGRFEILSLSGSFLPPPAPP
                **::.**********:*:*.*:*****::**.  *.**:*********************

AT3G60870.1     AASGLKVYLAGGQGQVIGGSVVGPLTASSPVVVMAASFGNASYERLPLEEEEETEREIDG
pt017143_POPTR_ AASGLTVYLAGGQGQVIGGSVAGPLLASGPVVVMAASFGNAAYERLPLEEDIESQTPMLG
                *****.***************.*** **.************:********: *::  : *

AT3G60870.1     ----------NAARAIGTQTQKQLMQDATS--FIGSPSNLINSVSLPGEAYWGT-QRPSF
pt017143_POPTR_ SGPLGSPGINNIGQQQQNQQQQQLMQDPKTSLFQGLPQNLLNSVQLPAEAYWGTGGRPPY
                          * .:   .* *:*****..:  * * *.**:***.**.******  **.:
BoxShade v3.31 C (beta, 970507) Output
AT3G60870.1     M D E V S - - - R S H T P Q F L S S D - - - H Q H Y H H Q N A - - - - - - - - - G R Q K R G R E E E G V E P N N - - - -
pt017143_POPTR_    M D P V S A H G R P L P P P F H T R D F H L H Q F Q H H Q Q Q N S E D E Q S G N G D L N R G Q K R E H D E I N N N N N T
 
AT3G60870.1     - I G E D L A T F P S G E E N I K K R R P R G R P A G S K N K P K A P I I V T R D S A N A F R C H V M E I T N A C D V M
pt017143_POPTR_    V E G L E L V P S S S G G E G E I S R R P R G R P A G S K N K P K P P I I I T R D S A N A L R S H V M E I A T G S D I M
 
AT3G60870.1     E S L A V F A R R R Q R G V C V L T G N G A V T N V T V R Q P G - - G G V V S L H G R F E I L S L S G S F L P P P A P P
pt017143_POPTR_    E S V S T F A R R R Q R G V C I L S G T G T V T N V T L K Q P A S P G A V V T L H G R F E I L S L S G S F L P P P A P P
 
AT3G60870.1     A A S G L K V Y L A G G Q G Q V I G G S V V G P L T A S S P V V V M A A S F G N A S Y E R L P L E E E E E T E R E I D G
pt017143_POPTR_    A A S G L T V Y L A G G Q G Q V I G G S V A G P L L A S G P V V V M A A S F G N A A Y E R L P L E E D I E S Q T P M L G
 
AT3G60870.1     - - - - - - - - - - N A A R A I G T Q T Q K Q L M Q D A T S - - F I G S P S N L I N S V S L P G E A Y W G T - Q R P S F
pt017143_POPTR_    S G P L G S P G I N N I G Q Q Q Q N Q Q Q Q Q L M Q D P K T S L F Q G L P Q N L L N S V Q L P A E A Y W G T G G R P P Y
 
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