fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001449 not found in 288aa AT2G45430.1 1st_not 0.467136150 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60870.1     MDEVSRSHTPQFLSSDHQ---HYHHQNA------GR-QKRGREEEGVEPNNIGEDLATFP
gm001449_Glyma0 --------MP--IIPHHQFQPHHNHQNTEDEAGNGRGQKRDRDE-----NAGGGGGATTP
                         *  : ..**   *::***:      ** ***.*:*     *  * . ** *

AT3G60870.1     -----SGEENIK--------KRRPRGRPAGSKNKPKAPIIVTRDSANAFRCHVMEITNAC
gm001449_Glyma0 PQGGGEGKESGSGDGGGSDMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGC
                     .*:*. .         ***************.***:*******:*.*****:*.*

AT3G60870.1     DVMESLAVFARRRQRGVCVLTGNGAVTNVTVRQPG--GGVVSLHGRFEILSLSGSFLPPP
gm001449_Glyma0 DIMESITAFARRRQRGVCVLSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPP
                *:***::.************:*.*:*****:***.  *.**:******************

AT3G60870.1     APPAASGLKVYLAGGQGQVIGGSVVGPLTASSPVVVMAASFGNASYERLPLEEEEETERE
gm001449_Glyma0 APPAASGLAIYLAGGQGQVVGGSVVGPLVASGPVVIMAASFGNAAYERLPL-EEEETPVA
                ******** :*********:********.**.***:********:****** *****   

AT3G60870.1     IDGNAARAIGT------------QTQKQLMQDATS---FIGSPSNLINSVSLPGEAYW-G
gm001449_Glyma0 VAGNG--GLGSPGIPGTQQQPQQQQQQQLVGDPNSSSLFHGMPQNLLNSVQLPAEGYWGG
                : **.  .:*:            * *:**: *..*   * * *.**:***.**.*.** *

AT3G60870.1     TQRPSF
gm001449_Glyma0 SARPPF
                : **.*
BoxShade v3.31 C (beta, 970507) Output
AT3G60870.1     M D E V S R S H T P Q F L S S D H Q - - - H Y H H Q N A - - - - - - G R - Q K R G R E E E G V E P N N I G E D L A T F P
gm001449_Glyma0    - - - - - - - - M P - - I I P H H Q F Q P H H N H Q N T E D E A G N G R G Q K R D R D E - - - - - N A G G G G G A T T P
 
AT3G60870.1     - - - - - S G E E N I K - - - - - - - - K R R P R G R P A G S K N K P K A P I I V T R D S A N A F R C H V M E I T N A C
gm001449_Glyma0    P Q G G G E G K E S G S G D G G G S D M G R R P R G R P A G S K N K P K P P I I I T R D S A N A L R S H V M E I A N G C
 
AT3G60870.1     D V M E S L A V F A R R R Q R G V C V L T G N G A V T N V T V R Q P G - - G G V V S L H G R F E I L S L S G S F L P P P
gm001449_Glyma0    D I M E S I T A F A R R R Q R G V C V L S G S G T V T N V T L R Q P A S P G A V V T L H G R F E I L S L S G S F L P P P
 
AT3G60870.1     A P P A A S G L K V Y L A G G Q G Q V I G G S V V G P L T A S S P V V V M A A S F G N A S Y E R L P L E E E E E T E R E
gm001449_Glyma0    A P P A A S G L A I Y L A G G Q G Q V V G G S V V G P L V A S G P V V I M A A S F G N A A Y E R L P L - E E E E T P V A
 
AT3G60870.1     I D G N A A R A I G T - - - - - - - - - - - - Q T Q K Q L M Q D A T S - - - F I G S P S N L I N S V S L P G E A Y W - G
gm001449_Glyma0    V A G N G - - G L G S P G I P G T Q Q Q P Q Q Q Q Q Q Q L V G D P N S S S L F H G M P Q N L L N S V Q L P A E G Y W G G
 
AT3G60870.1     T Q R P S F
gm001449_Glyma0    S A R P P F
 
0