fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm003502 not found in 128aa AT3G61250.1 1st_1st 0.363636363 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61250.1     MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKKNGHGSWRTLPKLAGLLRCGKSCRLRWTNY
Sm003502_Selmo1 MGRAPCCSKVGLNRGPWTPEEDMLLTKHIEQHGEGNWRALPKAAGLLRCGKSCRLRWVNY
                ***:***.*:**::******** :*. **:::*.*.**:*** **************.**

AT3G61250.1     LRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMG
Sm003502_Selmo1 LRPNVKRGNISEDEEDLIIMLHALLGNRWSLIAARMPGRTDNEIKNYWNTHLSKKLASRG
                ***::*** :: ***.*:* ***:*****: ***::********** *****.*:* * *

AT3G61250.1     LDPRTHEPLPSYGLAKQAPSSPTTRHMAQWESARVEAEARLSRESMLFSPSFYSGVVKTE
Sm003502_Selmo1 LDPKTHKP----------------------------------------------------
                ***:**:*                                                    

AT3G61250.1     CDHFLRIWNSEIGEAFRNLAPLDESTITSQSPCSRATSTSSALLKSSTNSWGGKEVTVAI
Sm003502_Selmo1 ------------------------------------------------------------
                                                                            

AT3G61250.1     HGSDYSPYSNDLEDDSTDSALQLLLDFPISDDDMSFLEENIDSYSQAPPIGLVSMVSKF
Sm003502_Selmo1 -----------------------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G61250.1     M G R T P C C D K I G L K K G P W T P E E D E V L V A H I K K N G H G S W R T L P K L A G L L R C G K S C R L R W T N Y
Sm003502_Selmo1    M G R A P C C S K V G L N R G P W T P E E D M L L T K H I E Q H G E G N W R A L P K A A G L L R C G K S C R L R W V N Y
 
AT3G61250.1     L R P D I K R G P F T A D E E K L V I Q L H A I L G N R W A A I A A Q L P G R T D N E I K N L W N T H L K K R L L S M G
Sm003502_Selmo1    L R P N V K R G N I S E D E E D L I I M L H A L L G N R W S L I A A R M P G R T D N E I K N Y W N T H L S K K L A S R G
 
AT3G61250.1     L D P R T H E P L P S Y G L A K Q A P S S P T T R H M A Q W E S A R V E A E A R L S R E S M L F S P S F Y S G V V K T E
Sm003502_Selmo1    L D P K T H K P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G61250.1     C D H F L R I W N S E I G E A F R N L A P L D E S T I T S Q S P C S R A T S T S S A L L K S S T N S W G G K E V T V A I
Sm003502_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G61250.1     H G S D Y S P Y S N D L E D D S T D S A L Q L L L D F P I S D D D M S F L E E N I D S Y S Q A P P I G L V S M V S K F
Sm003502_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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