fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018020 not found in 316aa AT3G61250.1 1st_1st 0.627787307 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61250.1     MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKKNGHGSWRTLPKLAGLLRCGKSCRLRWTNY
pt018020_POPTR_ MGRTPCCDKNGLKKGAWTPEEDELLVSYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
                ********* *****.*******:**::**********:*********************

AT3G61250.1     LRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMG
pt018020_POPTR_ LRPDIKRHPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCLG
                ******* *** :*********.**********:***********************.:*

AT3G61250.1     LDPRTHEPLPSYGLAKQAPSSPTTRHMAQWESARVEAEARLSRESMLFSPSFYSGVVKTE
pt018020_POPTR_ LDPQTHEPFTSRGPANKGPASPATRHMTQWESARLEAEARLSRESSLFLPPIPG---KID
                ***:****:.* * *::.*:**:****:******:********** ** *.: .   * :

AT3G61250.1     CDHFLRIWNSEIGEAFRNLAPLDESTITSQSPCSRATSTS-----SALLKSSTNSWGGKE
pt018020_POPTR_ CDYFLRIWNSEVGESFRRIN-MGGAKTACPSPVSQASSSTKCGSISAITADISPNLAGSS
                **:********:**:**.:  :. :. :. ** *:*:*::     **:  . : . .*..

AT3G61250.1     VTVAIHGSDYSPYS--NDLED--------------DSTDSALQLLLDFPISDDDMSFLEE
pt018020_POPTR_ AAASNQNEDMECKSCRSDAEDVMAGPDSSSSAESEDSTDSTLQLLLDFPI-NNDMSFLEG
                .:.: :..* .  *  .* **              *****:********* ::****** 

AT3G61250.1     NIDSYSQAPPIGLV---SMVSKF
pt018020_POPTR_ NIDSYATSS--GMLTGTSMIAPL
                *****: :.  *::   **:: :
BoxShade v3.31 C (beta, 970507) Output
AT3G61250.1     M G R T P C C D K I G L K K G P W T P E E D E V L V A H I K K N G H G S W R T L P K L A G L L R C G K S C R L R W T N Y
pt018020_POPTR_    M G R T P C C D K N G L K K G A W T P E E D E L L V S Y I K K N G H G S W R S L P K L A G L L R C G K S C R L R W T N Y
 
AT3G61250.1     L R P D I K R G P F T A D E E K L V I Q L H A I L G N R W A A I A A Q L P G R T D N E I K N L W N T H L K K R L L S M G
pt018020_POPTR_    L R P D I K R H P F T L E E E K L V I Q L H G I L G N R W A A I A S Q L P G R T D N E I K N L W N T H L K K R L L C L G
 
AT3G61250.1     L D P R T H E P L P S Y G L A K Q A P S S P T T R H M A Q W E S A R V E A E A R L S R E S M L F S P S F Y S G V V K T E
pt018020_POPTR_    L D P Q T H E P F T S R G P A N K G P A S P A T R H M T Q W E S A R L E A E A R L S R E S S L F L P P I P G - - - K I D
 
AT3G61250.1     C D H F L R I W N S E I G E A F R N L A P L D E S T I T S Q S P C S R A T S T S - - - - - S A L L K S S T N S W G G K E
pt018020_POPTR_    C D Y F L R I W N S E V G E S F R R I N - M G G A K T A C P S P V S Q A S S S T K C G S I S A I T A D I S P N L A G S S
 
AT3G61250.1     V T V A I H G S D Y S P Y S - - N D L E D - - - - - - - - - - - - - - D S T D S A L Q L L L D F P I S D D D M S F L E E
pt018020_POPTR_    A A A S N Q N E D M E C K S C R S D A E D V M A G P D S S S S A E S E D S T D S T L Q L L L D F P I - N N D M S F L E G
 
AT3G61250.1     N I D S Y S Q A P P I G L V - - - S M V S K F
pt018020_POPTR_    N I D S Y A T S S - - G M L T G T S M I A P L
 
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