fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb014341 not found in 298aa AT3G61250.1 not_1st 0.425385934 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61250.1     MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKKNGHGSWRTLPKLAGLLRCGKSCRLRWTNY
Sb014341_Sorbi1 MGRTPCCDSKGIKKGPWAPEEDKLLVDYVQANGTGNWRMLPKLAGLNRCGKSCRLRWTNY
                ********. *:*****:****::** ::: ** *.** ******* *************

AT3G61250.1     LRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMG
Sb014341_Sorbi1 LRPDIKRGPFTPEEHNSILQLHAIVGNKWSMIAAQLPGRTDNEIKNYWNTHMKKQLRQEG
                ***********.:*.: ::*****:**:*: *************** ****:**:* . *

AT3G61250.1     LDPRTHEPLPSYGLAKQAPSSPTTRHMAQWESARVEAEARLSR--------ESMLFSPSF
Sb014341_Sorbi1 AAAQL-----ATAAAAASSSCPAARHMAQWEIARLEAEARLSLLSSSATTIASAATASSS
                  .:      : . *  :.*.*::******* **:*******          *   :.* 

AT3G61250.1     YSGVVKTE---CDHFLRIWNSEIGEAFRNLAPLDESTITSQSPCSRATSTSSALLKSSTN
Sb014341_Sorbi1 SSTAVAAEHAAPDIFLRLWNSEVGDSFRGAAAVQQQ---RHGPEASAAAAAAGV------
                 * .* :*    * ***:****:*::**. *.:::.    :.* : *:::::.:      

AT3G61250.1     SWGGKEVTVAIHGSDYSPYSNDLEDDSTDSALQLLLDFPISDDDMSFLEENIDSYSQAPP
Sb014341_Sorbi1 --PAQALPAELGGDDSSAASTYGTEAAADDDYQAFLDLAM--EEFTLLQGRLGAFSVFPQ
                   .: :.. : *.* *. *.   : ::*.  * :**:.:  :::::*: .:.::*  * 

AT3G61250.1     IGLVS-----MVSKF-
Sb014341_Sorbi1 ADVFADAPCCLFAPFE
                 .:.:     :.: *
BoxShade v3.31 C (beta, 970507) Output
AT3G61250.1     M G R T P C C D K I G L K K G P W T P E E D E V L V A H I K K N G H G S W R T L P K L A G L L R C G K S C R L R W T N Y
Sb014341_Sorbi1    M G R T P C C D S K G I K K G P W A P E E D K L L V D Y V Q A N G T G N W R M L P K L A G L N R C G K S C R L R W T N Y
 
AT3G61250.1     L R P D I K R G P F T A D E E K L V I Q L H A I L G N R W A A I A A Q L P G R T D N E I K N L W N T H L K K R L L S M G
Sb014341_Sorbi1    L R P D I K R G P F T P E E H N S I L Q L H A I V G N K W S M I A A Q L P G R T D N E I K N Y W N T H M K K Q L R Q E G
 
AT3G61250.1     L D P R T H E P L P S Y G L A K Q A P S S P T T R H M A Q W E S A R V E A E A R L S R - - - - - - - - E S M L F S P S F
Sb014341_Sorbi1    A A A Q L - - - - - A T A A A A A S S S C P A A R H M A Q W E I A R L E A E A R L S L L S S S A T T I A S A A T A S S S
 
AT3G61250.1     Y S G V V K T E - - - C D H F L R I W N S E I G E A F R N L A P L D E S T I T S Q S P C S R A T S T S S A L L K S S T N
Sb014341_Sorbi1    S S T A V A A E H A A P D I F L R L W N S E V G D S F R G A A A V Q Q Q - - - R H G P E A S A A A A A A G V - - - - - -
 
AT3G61250.1     S W G G K E V T V A I H G S D Y S P Y S N D L E D D S T D S A L Q L L L D F P I S D D D M S F L E E N I D S Y S Q A P P
Sb014341_Sorbi1    - - P A Q A L P A E L G G D D S S A A S T Y G T E A A A D D D Y Q A F L D L A M - - E E F T L L Q G R L G A F S V F P Q
 
AT3G61250.1     I G L V S - - - - - M V S K F -
Sb014341_Sorbi1    A D V F A D A P C C L F A P F E
 
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