fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb011138 not found in 314aa AT3G61250.1 1st_1st 0.442538593 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61250.1     MGRTPCCDKI-GLKKGPWTPEEDEVLVAHIKKNGHGSWRTLPKLAGLLRCGKSCRLRWTN
Sb011138_Sorbi1 MGRAPCCDSTKGLKKGPWTPEEDKLLVDYIQTNGHGSWRLLPKLAGLNRCGKSCRLRWTN
                ***:****.  ************::** :*:.******* ******* ************

AT3G61250.1     YLRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSM
Sb011138_Sorbi1 YLRPDIKRGPFTPEEQKSIVQLHAIVGNKWSMIAAQLPGRTDNEIKNYWNTHLKKQLRRM
                ************.:*:* ::*****:**:*: *************** *******:*  *

AT3G61250.1     GLDPRTHEPLPSYGLAKQAPSSPTTRHMAQWESARVEAEARLSRESMLFSPSFYSGVVKT
Sb011138_Sorbi1 GLD----EPPPG-----PAAGSPAARHMAQWETARLQAEARL---SLLATASSSSGATAT
                ***    ** *.      *..**::*******:**::*****   *:* :.*  **.. *

AT3G61250.1     E------------------------CDHFLRIWNSEIGEAFRNLAPLDESTITSQSPCSR
Sb011138_Sorbi1 ATTAAATTSASSSSTVDLKACCAKPADIFLRLWSSDIGDSFRR---------------SR
                                         .* ***:*.*:**::**.               **

AT3G61250.1     ATSTSS----ALLKSSTNSWGGKEVTVAIH-----------GSDYSPYSNDLEDDSTDSA
Sb011138_Sorbi1 KTAAAAPAVPALLPPAPVVVKRKQDAMMIKQEAQAPLLGPVGDDSSAASNETEVAEALEE
                 *::::    *** .:.     *: :: *:           *.* *. **: *  .: . 

AT3G61250.1     LQLLLDFPISDDDMSFLEENIDSYSQAPPIGLV---SMVSKF-
Sb011138_Sorbi1 YQMFLDF--AGEELGLFHGRHGGFSLFPPLDVLAEASLDTAFK
                 *::***  :.:::.::. . ..:*  **:.::   *: : *
BoxShade v3.31 C (beta, 970507) Output
AT3G61250.1     M G R T P C C D K I - G L K K G P W T P E E D E V L V A H I K K N G H G S W R T L P K L A G L L R C G K S C R L R W T N
Sb011138_Sorbi1    M G R A P C C D S T K G L K K G P W T P E E D K L L V D Y I Q T N G H G S W R L L P K L A G L N R C G K S C R L R W T N
 
AT3G61250.1     Y L R P D I K R G P F T A D E E K L V I Q L H A I L G N R W A A I A A Q L P G R T D N E I K N L W N T H L K K R L L S M
Sb011138_Sorbi1    Y L R P D I K R G P F T P E E Q K S I V Q L H A I V G N K W S M I A A Q L P G R T D N E I K N Y W N T H L K K Q L R R M
 
AT3G61250.1     G L D P R T H E P L P S Y G L A K Q A P S S P T T R H M A Q W E S A R V E A E A R L S R E S M L F S P S F Y S G V V K T
Sb011138_Sorbi1    G L D - - - - E P P P G - - - - - P A A G S P A A R H M A Q W E T A R L Q A E A R L - - - S L L A T A S S S S G A T A T
 
AT3G61250.1     E - - - - - - - - - - - - - - - - - - - - - - - - C D H F L R I W N S E I G E A F R N L A P L D E S T I T S Q S P C S R
Sb011138_Sorbi1    A T T A A A T T S A S S S S T V D L K A C C A K P A D I F L R L W S S D I G D S F R R - - - - - - - - - - - - - - - S R
 
AT3G61250.1     A T S T S S - - - - A L L K S S T N S W G G K E V T V A I H - - - - - - - - - - - G S D Y S P Y S N D L E D D S T D S A
Sb011138_Sorbi1    K T A A A A P A V P A L L P P A P V V V K R K Q D A M M I K Q E A Q A P L L G P V G D D S S A A S N E T E V A E A L E E
 
AT3G61250.1     L Q L L L D F P I S D D D M S F L E E N I D S Y S Q A P P I G L V - - - S M V S K F -
Sb011138_Sorbi1    Y Q M F L D F - - A G E E L G L F H G R H G G F S L F P P L D V L A E A S L D T A F K
 
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