fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005868 not found in 272aa AT3G61250.1 1st_1st 0.588336192 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61250.1     MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKKN-GHGSWRTLPKLAGLLRCGKSCRLRWTN
gm005868_Glyma0 MGRKPCCDKMGLKKGPWTAEEDEILVNYINKNGGHGSWRSLPNLAGLLRCGKSCRLRWTN
                ***.*****:********.****:** :*:** ******:**:*****************

AT3G61250.1     YLRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSM
gm005868_Glyma0 YLRPDIKRGSFTLEDEKLIIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLICM
                *********.** ::***:****.**********:**********************:.*

AT3G61250.1     GLDPRTHEPLPS---YGLAKQAPSSPTTRHMAQWESARVEAEARLSRESMLFSPSFYSGV
gm005868_Glyma0 GLDPQTHQPLASPHNPNDKAHASSSTSTRHMAQWESARLEAEARLSRE-----PHLYYNN
                ****:**:**.*    .   :*.**.:***********:*********     * :* . 

AT3G61250.1     VKTECDHFLRIWNSEIGEAFRNLAPLDESTIT--SQSPCSRATSTSSALLKSSTNSWGGK
gm005868_Glyma0 NKTDSDYFLRIWNSDLGESFRDVHKL-ESSIKCESQSATTDLASLTPASIVKEEFLWGVK
                 **:.*:*******::**:**::  * **:*.  ***. :  :* :.* : ..   ** *

AT3G61250.1     EVTVAIHGSDYSPYSNDLEDDSTDSALQLLLDFPISDDDMSFLEENIDSYSQAPPIGLVS
gm005868_Glyma0 KIV-----SDSSSSSSELHHDSCDTSLQLLLDFPM-NNDMSFLE----------------
                ::.     ** *. *.:*..** *::********: ::******                

AT3G61250.1     MVSKF
gm005868_Glyma0 -----
BoxShade v3.31 C (beta, 970507) Output
AT3G61250.1     M G R T P C C D K I G L K K G P W T P E E D E V L V A H I K K N - G H G S W R T L P K L A G L L R C G K S C R L R W T N
gm005868_Glyma0    M G R K P C C D K M G L K K G P W T A E E D E I L V N Y I N K N G G H G S W R S L P N L A G L L R C G K S C R L R W T N
 
AT3G61250.1     Y L R P D I K R G P F T A D E E K L V I Q L H A I L G N R W A A I A A Q L P G R T D N E I K N L W N T H L K K R L L S M
gm005868_Glyma0    Y L R P D I K R G S F T L E D E K L I I Q L H G I L G N R W A A I A S Q L P G R T D N E I K N L W N T H L K K R L I C M
 
AT3G61250.1     G L D P R T H E P L P S - - - Y G L A K Q A P S S P T T R H M A Q W E S A R V E A E A R L S R E S M L F S P S F Y S G V
gm005868_Glyma0    G L D P Q T H Q P L A S P H N P N D K A H A S S S T S T R H M A Q W E S A R L E A E A R L S R E - - - - - P H L Y Y N N
 
AT3G61250.1     V K T E C D H F L R I W N S E I G E A F R N L A P L D E S T I T - - S Q S P C S R A T S T S S A L L K S S T N S W G G K
gm005868_Glyma0    N K T D S D Y F L R I W N S D L G E S F R D V H K L - E S S I K C E S Q S A T T D L A S L T P A S I V K E E F L W G V K
 
AT3G61250.1     E V T V A I H G S D Y S P Y S N D L E D D S T D S A L Q L L L D F P I S D D D M S F L E E N I D S Y S Q A P P I G L V S
gm005868_Glyma0    K I V - - - - - S D S S S S S S E L H H D S C D T S L Q L L L D F P M - N N D M S F L E - - - - - - - - - - - - - - - -
 
AT3G61250.1     M V S K F
gm005868_Glyma0    - - - - -
 
0