fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005856 not found in 340aa AT2G45850.2 1st_not 0.454361054 II
Pt017496 not found in 336aa AT2G45850.2 1st_not 0.454361054 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G61310.1     MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPNPNPN
pt017496_POPTR_ MDRRDAMAISGSASFYMHRGITSSG-----SMNV---SSNINTLSNTNVAF------QPN
gm005856_Glyma0 MDRGDQMTLPGSASYYMQRGIPGAG-----NQPVLHNSPNIGPLSNPNLPC------QSS
                *** * *::.**.*:*::***..:*     .  .   * .:  ::*.  .       :..

AT3G61310.1     PGGVSTGFVSPPLPVDSS-----PADSSAAAAGALVAPPSGDTSVKRKRGRPRKYGQDGG
pt017496_POPTR_ I-GANT--MGSTLPMEHPVAISPHGVNVGVPS-TM--PPSGEP-VKRKRGRPRKYGPD-G
gm005856_Glyma0 IGGGGT--IGSTLPLESS-GISAPCVNVSAPSGTL--P--GET-VKRKRGRPRKYGSD-G
                  * .*  :...**:: .        . ...: ::  *  *:. ************ * *

AT3G61310.1     SVSLALSPSISNVSPN----SNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVV
pt017496_POPTR_ AVSLALSSSLST-HPGTITPSQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITI
gm005856_Glyma0 AVSLALTPTPAS-HPGALAQGQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITI
                :*****:.: :.  *.    .:*********:*:**:*:*:** :..*:**.****:*.:

AT3G61310.1     SIGEDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYEGLFELISLSTSY
pt017496_POPTR_ AVGEDIATKIMSFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSY
gm005856_Glyma0 AVGEDIATKIMSFSQQGPRAICILSANGAVSTVTLRQPSTSGGTVTYEGRFEIVCLSGSY
                ::*****:*::***:*****:*:***.*****.** **:.* **: *** **::.** **

AT3G61310.1     LNTTDNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIW-AIPKGKIKK
pt017496_POPTR_ LLTNDGGSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSFLWGGGSKTKNKK
gm005856_Glyma0 LVADSGGSRNRTGGLSVSLASPDGRVVGGGVGGVLIAASPVQVILGSFSW-GASKTKIKK
                * : ...  **:*.*:**********:***:** ***** ****:*** * . .* * **

AT3G61310.1     RE--ETSEDVQDTDALENNNDNTAATSPPVPQQSQNIVQT-PVGIWSTGSRSMDMHHPHM
pt017496_POPTR_ VEGPEGAR---DSDHQTVENPVTPTSVQP----SQNLTPTSSMGVWP-GSRPVDMRSTHV
gm005856_Glyma0 KEGSEGAEVALETDHQTVHNPVAVNSISP----NQNLTPTSSLSPWP-ASRSLDMRNSHI
                 *  * :.   ::*    .*  :  :  *    .**:. * .:. *. .**.:**: .*:

AT3G61310.1     DIDLMRG
pt017496_POPTR_ DIDLMRG
gm005856_Glyma0 DIDLMRG
                *******
BoxShade v3.31 C (beta, 970507) Output
AT3G61310.1     M D R R D A M A L S G S G S Y Y I Q R G I P G S G P P P P Q T Q P T F H G S Q G F H H F T N S I S P F G S N P N P N P N
pt017496_POPTR_    M D R R D A M A I S G S A S F Y M H R G I T S S G - - - - - S M N V - - - S S N I N T L S N T N V A F - - - - - - Q P N
gm005856_Glyma0    M D R G D Q M T L P G S A S Y Y M Q R G I P G A G - - - - - N Q P V L H N S P N I G P L S N P N L P C - - - - - - Q S S
 
AT3G61310.1     P G G V S T G F V S P P L P V D S S - - - - - P A D S S A A A A G A L V A P P S G D T S V K R K R G R P R K Y G Q D G G
pt017496_POPTR_    I - G A N T - - M G S T L P M E H P V A I S P H G V N V G V P S - T M - - P P S G E P - V K R K R G R P R K Y G P D - G
gm005856_Glyma0    I G G G G T - - I G S T L P L E S S - G I S A P C V N V S A P S G T L - - P - - G E T - V K R K R G R P R K Y G S D - G
 
AT3G61310.1     S V S L A L S P S I S N V S P N - - - - S N K R G R G R P P G S G K K Q R L S S I G E M M P S S T G M S F T P H V I V V
pt017496_POPTR_    A V S L A L S S S L S T - H P G T I T P S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I
gm005856_Glyma0    A V S L A L T P T P A S - H P G A L A Q G Q K R G R G R P P G S G K K Q Q L A S L G E L M S G S A G M G F T P H I I T I
 
AT3G61310.1     S I G E D I A S K V I S F S H Q G P R A I C V L S A S G A V S T A T L L Q P A P S H G T I I Y E G L F E L I S L S T S Y
pt017496_POPTR_    A V G E D I A T K I M S F S Q Q G P R A V C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I L C L S G S Y
gm005856_Glyma0    A V G E D I A T K I M S F S Q Q G P R A I C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I V C L S G S Y
 
AT3G61310.1     L N T T D N D Y P N R T G S L A V S L A S P D G R V I G G G I G G P L I A A S Q V Q V I V G S F I W - A I P K G K I K K
pt017496_POPTR_    L L T N D G G S R N R S G G L S V S L A S P D G R V I G G G V G G V L I A A S P V Q V I V G S F L W G G G S K T K N K K
gm005856_Glyma0    L V A D S G G S R N R T G G L S V S L A S P D G R V V G G G V G G V L I A A S P V Q V I L G S F S W - G A S K T K I K K
 
AT3G61310.1     R E - - E T S E D V Q D T D A L E N N N D N T A A T S P P V P Q Q S Q N I V Q T - P V G I W S T G S R S M D M H H P H M
pt017496_POPTR_    V E G P E G A R - - - D S D H Q T V E N P V T P T S V Q P - - - - S Q N L T P T S S M G V W P - G S R P V D M R S T H V
gm005856_Glyma0    K E G S E G A E V A L E T D H Q T V H N P V A V N S I S P - - - - N Q N L T P T S S L S P W P - A S R S L D M R N S H I
 
AT3G61310.1     D I D L M R G
pt017496_POPTR_    D I D L M R G
gm005856_Glyma0    D I D L M R G
 
0