fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017496 not found in 336aa AT2G45850.2 1st_not 0.454361054 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61310.1     MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPNPNPN
pt017496_POPTR_ MDRRDAMAISGSASFYMHRGITSSG--------SMNVSSNINTLSNTNVAF------QPN
                ********:***.*:*::***..**        ::: *..:: ::*:  .*      :**

AT3G61310.1     PGGVSTGFVSP-PLPVDSSPADSSAAAAGALVAPPSGDTSVKRKRGRPRKYGQDGGSVSL
pt017496_POPTR_ IGANTMGSTLPMEHPVAISPHGVNVGVPSTM--PPSGE-PVKRKRGRPRKYGPD-GAVSL
                 *. : * . *   **  ** . ......::  ****: .************ * *:***

AT3G61310.1     ALSPSIS----NVSPNSNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVVSIGE
pt017496_POPTR_ ALSSSLSTHPGTITP-SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGE
                ***.*:*    .::* *:*********:*:**:*:*:** :..*:**.****:*.:::**

AT3G61310.1     DIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYEGLFELISLSTSYLNTT
pt017496_POPTR_ DIATKIMSFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLTN
                ***:*::***:*****:*:***.*****.** **:.* **: *** **::.** *** *.

AT3G61310.1     DNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIWAIPKGKIKKREETS
pt017496_POPTR_ DGGSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSFLWGGGSKTKNKKVEGP
                *..  **:*.*:**************:** ***** ********:*.  . . :*: * .

AT3G61310.1     EDVQDTD--ALENNNDNTAATSPPVPQQSQNIVQT-PVGIWSTGSRSMDMHHPHMDIDLM
pt017496_POPTR_ EGARDSDHQTVEN------PVTPTSVQPSQNLTPTSSMGVWP-GSRPVDMRSTHVDIDLM
                *..:*:*  ::**      ..:*.  * ***:. * .:*:*. ***.:**: .*:*****

AT3G61310.1     RG
pt017496_POPTR_ RG
                **
BoxShade v3.31 C (beta, 970507) Output
AT3G61310.1     M D R R D A M A L S G S G S Y Y I Q R G I P G S G P P P P Q T Q P T F H G S Q G F H H F T N S I S P F G S N P N P N P N
pt017496_POPTR_    M D R R D A M A I S G S A S F Y M H R G I T S S G - - - - - - - - S M N V S S N I N T L S N T N V A F - - - - - - Q P N
 
AT3G61310.1     P G G V S T G F V S P - P L P V D S S P A D S S A A A A G A L V A P P S G D T S V K R K R G R P R K Y G Q D G G S V S L
pt017496_POPTR_    I G A N T M G S T L P M E H P V A I S P H G V N V G V P S T M - - P P S G E - P V K R K R G R P R K Y G P D - G A V S L
 
AT3G61310.1     A L S P S I S - - - - N V S P N S N K R G R G R P P G S G K K Q R L S S I G E M M P S S T G M S F T P H V I V V S I G E
pt017496_POPTR_    A L S S S L S T H P G T I T P - S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G E
 
AT3G61310.1     D I A S K V I S F S H Q G P R A I C V L S A S G A V S T A T L L Q P A P S H G T I I Y E G L F E L I S L S T S Y L N T T
pt017496_POPTR_    D I A T K I M S F S Q Q G P R A V C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I L C L S G S Y L L T N
 
AT3G61310.1     D N D Y P N R T G S L A V S L A S P D G R V I G G G I G G P L I A A S Q V Q V I V G S F I W A I P K G K I K K R E E T S
pt017496_POPTR_    D G G S R N R S G G L S V S L A S P D G R V I G G G V G G V L I A A S P V Q V I V G S F L W G G G S K T K N K K V E G P
 
AT3G61310.1     E D V Q D T D - - A L E N N N D N T A A T S P P V P Q Q S Q N I V Q T - P V G I W S T G S R S M D M H H P H M D I D L M
pt017496_POPTR_    E G A R D S D H Q T V E N - - - - - - P V T P T S V Q P S Q N L T P T S S M G V W P - G S R P V D M R S T H V D I D L M
 
AT3G61310.1     R G
pt017496_POPTR_    R G
 
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