fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039055 not found in 328aa AT2G45850.2 not_not 0.442190669 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61310.1     MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPNPNPN
pt039055_POPTR_ MDRRDTMTISGSASFFMQ----GSG-----THPSLNVSSGINTLSNINAPF--QPNMGAN
                *****:*::***.*:::*    ***     *:*::: *.*:: ::*  :**  :** ..*

AT3G61310.1     PGGVSTGFVSPPLPVDSSPADSSAAAAGALVAPPSGDTSVKRKRGRPRKYGQDGGSVSLA
pt039055_POPTR_ TMGSALLMEHP-----------AAISVGELSTMVSGQPE-KRKRGRPRKYGPD-GAVSLA
                . * :  :  *           :* :.* * :  **:.. *********** * *:****

AT3G61310.1     LSPSISN---VSPNSNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVVSIGEDI
pt039055_POPTR_ LSPSLSTHPETSIPSQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDI
                ****:*.   .*  *:*********:*:**:*:*:** :..*:**.****:*.:::****

AT3G61310.1     ASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYEGLFELISLSTSYLNTTDN
pt039055_POPTR_ ATKIMSFSQQGPRAICILSANGAVSTVTLHQPSTSGGTVTYEGRFEILCLSGSYLFSKDG
                *:*::***:*******:***.*****.** **:.* **: *** **::.** *** :.*.

AT3G61310.1     DYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIWAIPKGKIKKREETSED
pt039055_POPTR_ GSRNRTGGLSVSLASPDGCVIGGGVGGVLIAASPVQVIAGSFLWGGSKTK-NKKVEGAEV
                .  ****.*:******** *****:** ***** ****.***:*. .* * :*: * :* 

AT3G61310.1     VQDTD--ALENNNDNTAATSPPVPQQSQNIVQT-PVGIWSTGSRSMDMHHPHMDIDLMRG
pt039055_POPTR_ ARDSDHQTVEN------PVTPTSVQPSLNLTPTSSMGVWP-GSRSVDMRNTHVDIDLMRG
                .:*:*  ::**      ..:*.  * * *:. * .:*:*. ****:**::.*:*******
BoxShade v3.31 C (beta, 970507) Output
AT3G61310.1     M D R R D A M A L S G S G S Y Y I Q R G I P G S G P P P P Q T Q P T F H G S Q G F H H F T N S I S P F G S N P N P N P N
pt039055_POPTR_    M D R R D T M T I S G S A S F F M Q - - - - G S G - - - - - T H P S L N V S S G I N T L S N I N A P F - - Q P N M G A N
 
AT3G61310.1     P G G V S T G F V S P P L P V D S S P A D S S A A A A G A L V A P P S G D T S V K R K R G R P R K Y G Q D G G S V S L A
pt039055_POPTR_    T M G S A L L M E H P - - - - - - - - - - - A A I S V G E L S T M V S G Q P E - K R K R G R P R K Y G P D - G A V S L A
 
AT3G61310.1     L S P S I S N - - - V S P N S N K R G R G R P P G S G K K Q R L S S I G E M M P S S T G M S F T P H V I V V S I G E D I
pt039055_POPTR_    L S P S L S T H P E T S I P S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G E D I
 
AT3G61310.1     A S K V I S F S H Q G P R A I C V L S A S G A V S T A T L L Q P A P S H G T I I Y E G L F E L I S L S T S Y L N T T D N
pt039055_POPTR_    A T K I M S F S Q Q G P R A I C I L S A N G A V S T V T L H Q P S T S G G T V T Y E G R F E I L C L S G S Y L F S K D G
 
AT3G61310.1     D Y P N R T G S L A V S L A S P D G R V I G G G I G G P L I A A S Q V Q V I V G S F I W A I P K G K I K K R E E T S E D
pt039055_POPTR_    G S R N R T G G L S V S L A S P D G C V I G G G V G G V L I A A S P V Q V I A G S F L W G G S K T K - N K K V E G A E V
 
AT3G61310.1     V Q D T D - - A L E N N N D N T A A T S P P V P Q Q S Q N I V Q T - P V G I W S T G S R S M D M H H P H M D I D L M R G
pt039055_POPTR_    A R D S D H Q T V E N - - - - - - P V T P T S V Q P S L N L T P T S S M G V W P - G S R S V D M R N T H V D I D L M R G
 
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