fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017496 not found in 336aa AT2G45850.2 1st_not 0.454361054 II
Pt039055 not found in 328aa AT2G45850.2 not_not 0.442190669 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G61310.1     MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPNPNPN
pt017496_POPTR_ MDRRDAMAISGSASFYMHRGI--------TSSGSMNVSSNINTLSNTNVAF------QPN
pt039055_POPTR_ MDRRDTMTISGSASFFM-QGS--------GTHPSLNVSSGINTLSNINAPF------QPN
                *****:*::***.*::: :*          :  ::: *..:: ::*   .*      :**

AT3G61310.1     PGGVSTGFVSPPLPVDSSPADS-SAAAAGALVAP-PSGDTSVKRKRGRPRKYGQDGGSVS
pt017496_POPTR_ IGANTMG---STLPMEHPVAISPHGVNVGVPSTMPPSGE-PVKRKRGRPRKYGPD-GAVS
pt039055_POPTR_ MGANTMG---SALLMEHPAAIS-----VGELSTM-VSGQ-PEKRKRGRPRKYGPD-GAVS
                 *. : *   ..* :: . * *     .*   :   **: . *********** * *:**

AT3G61310.1     LALSPSIS----NVSPNSNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVVSIG
pt017496_POPTR_ LALSSSLSTHPGTITP-SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVG
pt039055_POPTR_ LALSPSLSTHPETSIP-SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVG
                ****.*:*    .  * *:*********:*:**:*:*:** :..*:**.****:*.:::*

AT3G61310.1     EDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYEGLFELISLSTSYLNT
pt017496_POPTR_ EDIATKIMSFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLT
pt039055_POPTR_ EDIATKIMSFSQQGPRAICILSANGAVSTVTLHQPSTSGGTVTYEGRFEILCLSGSYLFS
                ****:*::***:*****:*:***.*****.** **:.* **: *** **::.** *** :

AT3G61310.1     TDNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIW-AIPKGKIKKREE
pt017496_POPTR_ NDGGSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSFLWGGGSKTK-NKKVE
pt039055_POPTR_ KDGGSRNRTGGLSVSLASPDGCVIGGGVGGVLIAASPVQVIAGSFLW-GGSKTK-NKKVE
                .*..  **:*.*:******** *****:** ***** ****.***:* . .* * :*: *

AT3G61310.1     TSEDVQDTD--ALENNNDNTAATSPPVPQQSQNIVQT-PVGIWSTGSRSMDMHHPHMDID
pt017496_POPTR_ GPEGARDSDHQTVEN------PVTPTSVQPSQNLTPTSSMGVWP-GSRPVDMRSTHVDID
pt039055_POPTR_ GAEVARDSDHQTVEN------PVTPTSVQPSLNLTPTSSMGVWP-GSRSVDMRNTHVDID
                 .* .:*:*  ::**      ..:*.  * * *:. * .:*:*. ***.:**: .*:***

AT3G61310.1     LMRG
pt017496_POPTR_ LMRG
pt039055_POPTR_ LMRG
                ****
BoxShade v3.31 C (beta, 970507) Output
AT3G61310.1     M D R R D A M A L S G S G S Y Y I Q R G I P G S G P P P P Q T Q P T F H G S Q G F H H F T N S I S P F G S N P N P N P N
pt017496_POPTR_    M D R R D A M A I S G S A S F Y M H R G I - - - - - - - - T S S G S M N V S S N I N T L S N T N V A F - - - - - - Q P N
pt039055_POPTR_    M D R R D T M T I S G S A S F F M - Q G S - - - - - - - - G T H P S L N V S S G I N T L S N I N A P F - - - - - - Q P N
 
AT3G61310.1     P G G V S T G F V S P P L P V D S S P A D S - S A A A A G A L V A P - P S G D T S V K R K R G R P R K Y G Q D G G S V S
pt017496_POPTR_    I G A N T M G - - - S T L P M E H P V A I S P H G V N V G V P S T M P P S G E - P V K R K R G R P R K Y G P D - G A V S
pt039055_POPTR_    M G A N T M G - - - S A L L M E H P A A I S - - - - - V G E L S T M - V S G Q - P E K R K R G R P R K Y G P D - G A V S
 
AT3G61310.1     L A L S P S I S - - - - N V S P N S N K R G R G R P P G S G K K Q R L S S I G E M M P S S T G M S F T P H V I V V S I G
pt017496_POPTR_    L A L S S S L S T H P G T I T P - S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G
pt039055_POPTR_    L A L S P S L S T H P E T S I P - S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G
 
AT3G61310.1     E D I A S K V I S F S H Q G P R A I C V L S A S G A V S T A T L L Q P A P S H G T I I Y E G L F E L I S L S T S Y L N T
pt017496_POPTR_    E D I A T K I M S F S Q Q G P R A V C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I L C L S G S Y L L T
pt039055_POPTR_    E D I A T K I M S F S Q Q G P R A I C I L S A N G A V S T V T L H Q P S T S G G T V T Y E G R F E I L C L S G S Y L F S
 
AT3G61310.1     T D N D Y P N R T G S L A V S L A S P D G R V I G G G I G G P L I A A S Q V Q V I V G S F I W - A I P K G K I K K R E E
pt017496_POPTR_    N D G G S R N R S G G L S V S L A S P D G R V I G G G V G G V L I A A S P V Q V I V G S F L W G G G S K T K - N K K V E
pt039055_POPTR_    K D G G S R N R T G G L S V S L A S P D G C V I G G G V G G V L I A A S P V Q V I A G S F L W - G G S K T K - N K K V E
 
AT3G61310.1     T S E D V Q D T D - - A L E N N N D N T A A T S P P V P Q Q S Q N I V Q T - P V G I W S T G S R S M D M H H P H M D I D
pt017496_POPTR_    G P E G A R D S D H Q T V E N - - - - - - P V T P T S V Q P S Q N L T P T S S M G V W P - G S R P V D M R S T H V D I D
pt039055_POPTR_    G A E V A R D S D H Q T V E N - - - - - - P V T P T S V Q P S L N L T P T S S M G V W P - G S R S V D M R N T H V D I D
 
AT3G61310.1     L M R G
pt017496_POPTR_    L M R G
pt039055_POPTR_    L M R G
 
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