fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005856 not found in 340aa AT2G45850.2 1st_not 0.454361054 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61310.1     MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPN-P-N
gm005856_Glyma0 MDRGDQMTLPGSASYYMQRGIPGAG-----NQPVLHNSP-------NIGPL-SNPNLPCQ
                *** * *:*.**.***:******:*     .**.:*.*        .*.*: **** * :

AT3G61310.1     PNPGGVSTGFVSPPLPVDSS----PADSSAAAAGALVAPPSGDTSVKRKRGRPRKYGQDG
gm005856_Glyma0 SSIGG--GGTIGSTLPLESSGISAPCVNVSAPSGTL----PGET-VKRKRGRPRKYGSD-
                .. **   * :...**::**    *. . :*.:*:*    .*:* ************.* 

AT3G61310.1     GSVSLALSPSISNVSPNSN--------KRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTP
gm005856_Glyma0 GAVSLALTP-----TPASHPGALAQGQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTP
                *:*****:*     :* *:        **************:*:*:**:*..*:**.***

AT3G61310.1     HVIVVSIGEDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYEGLFELIS
gm005856_Glyma0 HIITIAVGEDIATKIMSFSQQGPRAICILSANGAVSTVTLRQPSTSGGTVTYEGRFEIVC
                *:*.:::*****:*::***:*******:***.*****.** **:.* **: *** **::.

AT3G61310.1     LSTSYLNTTDNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIWAIPKG
gm005856_Glyma0 LSGSYLVADSGGSRNRTGGLSVSLASPDGRVVGGGVGGVLIAASPVQVILGSFSWGASKT
                ** *** : ...  ****.*:**********:***:** ***** ****:*** *. .* 

AT3G61310.1     KIKKRE--ETSEDVQDTDALENNNDNTAATSPPVPQQSQNIVQT-PVGIWSTGSRSMDMH
gm005856_Glyma0 KIKKKEGSEGAEVALETDHQTVHNPVAVNSISP----NQNLTPTSSLSPWP-ASRSLDMR
                ****:*  * :* . :**    :*  :. : .*    .**:. * .:. *. .***:**:

AT3G61310.1     HPHMDIDLMRG
gm005856_Glyma0 NSHIDIDLMRG
                :.*:*******
BoxShade v3.31 C (beta, 970507) Output
AT3G61310.1     M D R R D A M A L S G S G S Y Y I Q R G I P G S G P P P P Q T Q P T F H G S Q G F H H F T N S I S P F G S N P N - P - N
gm005856_Glyma0    M D R G D Q M T L P G S A S Y Y M Q R G I P G A G - - - - - N Q P V L H N S P - - - - - - - N I G P L - S N P N L P C Q
 
AT3G61310.1     P N P G G V S T G F V S P P L P V D S S - - - - P A D S S A A A A G A L V A P P S G D T S V K R K R G R P R K Y G Q D G
gm005856_Glyma0    S S I G G - - G G T I G S T L P L E S S G I S A P C V N V S A P S G T L - - - - P G E T - V K R K R G R P R K Y G S D -
 
AT3G61310.1     G S V S L A L S P S I S N V S P N S N - - - - - - - - K R G R G R P P G S G K K Q R L S S I G E M M P S S T G M S F T P
gm005856_Glyma0    G A V S L A L T P - - - - - T P A S H P G A L A Q G Q K R G R G R P P G S G K K Q Q L A S L G E L M S G S A G M G F T P
 
AT3G61310.1     H V I V V S I G E D I A S K V I S F S H Q G P R A I C V L S A S G A V S T A T L L Q P A P S H G T I I Y E G L F E L I S
gm005856_Glyma0    H I I T I A V G E D I A T K I M S F S Q Q G P R A I C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I V C
 
AT3G61310.1     L S T S Y L N T T D N D Y P N R T G S L A V S L A S P D G R V I G G G I G G P L I A A S Q V Q V I V G S F I W A I P K G
gm005856_Glyma0    L S G S Y L V A D S G G S R N R T G G L S V S L A S P D G R V V G G G V G G V L I A A S P V Q V I L G S F S W G A S K T
 
AT3G61310.1     K I K K R E - - E T S E D V Q D T D A L E N N N D N T A A T S P P V P Q Q S Q N I V Q T - P V G I W S T G S R S M D M H
gm005856_Glyma0    K I K K K E G S E G A E V A L E T D H Q T V H N P V A V N S I S P - - - - N Q N L T P T S S L S P W P - A S R S L D M R
 
AT3G61310.1     H P H M D I D L M R G
gm005856_Glyma0    N S H I D I D L M R G
 
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