fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018044 not found in 229aa AT3G61850.3 1st_not 0.411663807 II
Pt037768 not found in 231aa AT3G61850.1 not_1st 0.409948542 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G61850.1     MDATKWTQGFQEMINVKPMEQMISSTNNNTPQQQPTFIATNTRPNATASNGGSGGNTNNT
pt037768_POPTR_ ------------------MEEMTSNTCG--------------RPVL--------------
pt018044_POPTR_ ------------------MDEMASNSCG--------------RPGV--------------
                                  *::* *.: .              **                

AT3G61850.1     ATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG
pt037768_POPTR_ ----ERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVG
pt018044_POPTR_ ----ERKPRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVG
                     **.****::**************************** *****************

AT3G61850.1     GSSRKNKRSSTPLASPSN--PKLPDLNPPIL--FSSQIPNKSN--KDLNLLSFPVMQDHH
pt037768_POPTR_ GGSRKNKRSTSSSVAASAAPSKLPDLNPPNLSHFSSQNPKSAHEGQDLN-LAFPAMQD--
pt018044_POPTR_ GGSRKNKRSTSSSVATSS--SKLPDLNPPSLSHFSSQNPKSTHEGQDLN-LAFPAMQD--
                *.*******::. .:.*   .******** *  **** *:.::  :*** *:**.***  

AT3G61850.1     HHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQG
pt037768_POPTR_ SQALELLRS-GIASRGLNSFIPTPMPDSNT-LYSSGGFP----LQELKPTLSFSLD---G
pt018044_POPTR_ SQAMELLRS-GFASRGLNTFIPTPMPDSNT-LYSSGGFP----LQELRPTLSFPAD---G
                 :*:***** *.:***:*:*:*  * ***: **** ***     :: . .***. *   *

AT3G61850.1     IGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSSTT----QEKSHGNNT--YWNGMF
pt037768_POPTR_ LG-----SRYGVQEHN------GRLLFPFGELKQLSS-TNEVDQNKGQGTSSTGYWNGMF
pt018044_POPTR_ LG-----SRYGIQENS------GRLLFPFGELKQLSSTTSEVDQNKGQGGSS-GYWNGMF
                :*     *.   *::.      .*:****.::*:*** *    *:*.:* .:  ******

AT3G61850.1     SNTGGSSW
pt037768_POPTR_ ---GGGSW
pt018044_POPTR_ ---GGGSW
                   **.**
BoxShade v3.31 C (beta, 970507) Output
AT3G61850.1     M D A T K W T Q G F Q E M I N V K P M E Q M I S S T N N N T P Q Q Q P T F I A T N T R P N A T A S N G G S G G N T N N T
pt037768_POPTR_    - - - - - - - - - - - - - - - - - - M E E M T S N T C G - - - - - - - - - - - - - - R P V L - - - - - - - - - - - - - -
pt018044_POPTR_    - - - - - - - - - - - - - - - - - - M D E M A S N S C G - - - - - - - - - - - - - - R P G V - - - - - - - - - - - - - -
 
AT3G61850.1     A T M E T R K A R P Q E K V N C P R C N S T N T K F C Y Y N N Y S L T Q P R Y F C K G C R R Y W T E G G S L R N V P V G
pt037768_POPTR_    - - - - E R K A R P Q E Q L N C P R C N S T N T K F C Y Y N N Y S L T Q P R Y F C K T C R R Y W T E G G S L R N V P V G
pt018044_POPTR_    - - - - E R K P R P Q E Q L N C P R C N S T N T K F C Y Y N N Y S L T Q P R Y F C K T C R R Y W T E G G S L R N V P V G
 
AT3G61850.1     G S S R K N K R S S T P L A S P S N - - P K L P D L N P P I L - - F S S Q I P N K S N - - K D L N L L S F P V M Q D H H
pt037768_POPTR_    G G S R K N K R S T S S S V A A S A A P S K L P D L N P P N L S H F S S Q N P K S A H E G Q D L N - L A F P A M Q D - -
pt018044_POPTR_    G G S R K N K R S T S S S V A T S S - - S K L P D L N P P S L S H F S S Q N P K S T H E G Q D L N - L A F P A M Q D - -
 
AT3G61850.1     H H A L E L L R S N G V S S R G M N T F L P G Q M M D S N S V L Y S S L G F P T M P D Y K Q S N N N L S F S I D H H Q G
pt037768_POPTR_    S Q A L E L L R S - G I A S R G L N S F I P T P M P D S N T - L Y S S G G F P - - - - L Q E L K P T L S F S L D - - - G
pt018044_POPTR_    S Q A M E L L R S - G F A S R G L N T F I P T P M P D S N T - L Y S S G G F P - - - - L Q E L R P T L S F P A D - - - G
 
AT3G61850.1     I G H N T I N S N Q R A Q D N N D D M N G A S R V L F P F S D M K E L S S T T - - - - Q E K S H G N N T - - Y W N G M F
pt037768_POPTR_    L G - - - - - S R Y G V Q E H N - - - - - - G R L L F P F G E L K Q L S S - T N E V D Q N K G Q G T S S T G Y W N G M F
pt018044_POPTR_    L G - - - - - S R Y G I Q E N S - - - - - - G R L L F P F G E L K Q L S S T T S E V D Q N K G Q G G S S - G Y W N G M F
 
AT3G61850.1     S N T G G S S W
pt037768_POPTR_    - - - G G G S W
pt018044_POPTR_    - - - G G G S W
 
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