fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61910.1 ISNIKIDLDVIPDIDLN at 37/334 in AT3G61910.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017516 not found in 419aa AT2G46770.1 not_not 0.478005865 III
Gm053370 not found in 265aa AT2G46770.1 not_not 0.407624633 III
Gm053372 not found in 265aa AT2G46770.1 not_not 0.406158357 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G61910.1     -----MNISVNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWD
gm053372_Glyma1 MPEMEMSICVNGESQVPPGFRFHPTEEELLQYYLRKKMSNEKIDLDVIRDVDLNRLEPWD
gm017516_Glyma0 MPE-NMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWD
gm053370_Glyma1 MPEMKMSICVNGESQVPPGFRFHPTEEELLQYYLRKKVSNEKIDLDVIRDVDLNRLEPWD
                     *.*.***:*****************:******:*  ******* *:***:*****

AT3G61910.1     IQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRK
gm053372_Glyma1 IQEMCKIGSSPQNDWYLFSHKYKKYPTGSRTNRATSVGFWKATGRDKVIYSNGKIIGMRK
gm017516_Glyma0 IQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRK
gm053370_Glyma1 IQEMCKIGSSPQNDWYLFSHKDKKYPTGSRTNRAIIVGFWKATGRDKVIYSNGKIIGMRK
                *** ****::******::*** ******:*****  .**********.**:**. *****

AT3G61910.1     TLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIG---SDEGWVVCRV
gm053372_Glyma1 TLVFYKGRAPNGQKSDWIMHEYRLDD---INNTNE---------------MEHGWVVCRV
gm017516_Glyma0 TLVFYKGRAPHGQKSDWIMHEYRLDD----NNTADTNI---VSNVMGDAAQEEGWVVCRI
gm053370_Glyma1 TLVFYKGRAPNGQKSDWIMHEYRLDD---INNTNE---------------MEHGWVVCRV
                **********:**************:    ..  :                :.******:

AT3G61910.1     FKKNNLCKNMISSSPAS-----SVKTPSFNEETIEQLLEVMGQSCKGEIVL---------
gm053372_Glyma1 FKKKNVPLKTLD------------------------------------------------
gm017516_Glyma0 FKKKN-HLKTLDSPLASGEDRRSHLFDSCDEGALEQILEQMGRSCKEESSYEGNYRNYGR
gm053370_Glyma1 FKKKNVPLKTLD------------------------------------------------
                ***:*   : :.                                                

AT3G61910.1     -----------------DPFLKLPNLECHNNTTITS------------------------
gm053372_Glyma1 ---------------------------SPKSMTM----------NMVT------------
gm017516_Glyma0 FTRPYETTGLNNGGGYNDRFMKLPSLESPKSASMESHHNTNNNNNMNSNNNNNGDNNENN
gm053370_Glyma1 ---------------------------SPKSMTM----------NMFT------------
                                           . :. ::                          

AT3G61910.1     ----YQWLI------DDQVNNC-HVSKVMDP-----------------SFITSWAALDRL
gm053372_Glyma1 -----------------ESDYC--------------------------GGFTSWESLDQL
gm017516_Glyma0 NNNGYHPMIPVEMGTDNEGSFTTHQVSGGDPNNNNNNMVHPLEVGSGGGGLTNWAALDRL
gm053370_Glyma1 -----------------ESDYC--------------------------GGFTNWESLDQL
                                 : .                            . :*.* :**:*

AT3G61910.1     VASQLNGPNS-----YSIPAVNETSQSPYHGLN--RSGCNTGLTP---DYYIPEIDLWNE
gm053372_Glyma1 VASQLNGQTETYCSDLQFPAFLSSSYIAT------TTTTTTHIAPTIQDYPSYDIDLWN-
gm017516_Glyma0 VASQLNGQTD------------ASRQLACA-FNDPTMYCTTFINPTTQDFTS-EIDLWN-
gm053370_Glyma1 VASQLNGQTETYCSDLQFPAFLSSSYIA----------TTTHIAPTIQDYPSYDIDLWN-
                ******* ..             :   .           .* : *   *:   :***** 

AT3G61910.1     ADFARTT----------CHLLNGSG
gm053372_Glyma1 --HCAS--------CPTLQM-----
gm017516_Glyma0 --FTRSTSSLLASSEPLCHVSNTSV
gm053370_Glyma1 --HCASR----VSNTPNVTL-----
                  .  :             :
BoxShade v3.31 C (beta, 970507) Output
AT3G61910.1     - - - - - M N I S V N G Q S Q V P P G F R F H P T E E E L L K Y Y L R K K I S N I K I D L D V I P D I D L N K L E P W D
gm053372_Glyma1    M P E M E M S I C V N G E S Q V P P G F R F H P T E E E L L Q Y Y L R K K M S N E K I D L D V I R D V D L N R L E P W D
gm017516_Glyma0    M P E - N M S I S V N G Q S Q V P P G F R F H P T E E E L L Q Y Y L R K K V S Y E K I D L D V I R D V D L N K L E P W D
gm053370_Glyma1    M P E M K M S I C V N G E S Q V P P G F R F H P T E E E L L Q Y Y L R K K V S N E K I D L D V I R D V D L N R L E P W D
 
AT3G61910.1     I Q E M C K I G T T P Q N D W Y F Y S H K D K K Y P T G T R T N R A T T V G F W K A T G R D K T I Y T N G D R I G M R K
gm053372_Glyma1    I Q E M C K I G S S P Q N D W Y L F S H K Y K K Y P T G S R T N R A T S V G F W K A T G R D K V I Y S N G K I I G M R K
gm017516_Glyma0    I Q E K C K I G T T P Q N D W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K V I Y S N G K R I G M R K
gm053370_Glyma1    I Q E M C K I G S S P Q N D W Y L F S H K D K K Y P T G S R T N R A I I V G F W K A T G R D K V I Y S N G K I I G M R K
 
AT3G61910.1     T L V F Y K G R A P H G Q K S D W I M H E Y R L D E S V L I S S C G D H D V N V E T C D V I G - - - S D E G W V V C R V
gm053372_Glyma1    T L V F Y K G R A P N G Q K S D W I M H E Y R L D D - - - I N N T N E - - - - - - - - - - - - - - - M E H G W V V C R V
gm017516_Glyma0    T L V F Y K G R A P H G Q K S D W I M H E Y R L D D - - - - N N T A D T N I - - - V S N V M G D A A Q E E G W V V C R I
gm053370_Glyma1    T L V F Y K G R A P N G Q K S D W I M H E Y R L D D - - - I N N T N E - - - - - - - - - - - - - - - M E H G W V V C R V
 
AT3G61910.1     F K K N N L C K N M I S S S P A S - - - - - S V K T P S F N E E T I E Q L L E V M G Q S C K G E I V L - - - - - - - - -
gm053372_Glyma1    F K K K N V P L K T L D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm017516_Glyma0    F K K K N - H L K T L D S P L A S G E D R R S H L F D S C D E G A L E Q I L E Q M G R S C K E E S S Y E G N Y R N Y G R
gm053370_Glyma1    F K K K N V P L K T L D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G61910.1     - - - - - - - - - - - - - - - - - D P F L K L P N L E C H N N T T I T S - - - - - - - - - - - - - - - - - - - - - - - -
gm053372_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - S P K S M T M - - - - - - - - - - N M V T - - - - - - - - - - - -
gm017516_Glyma0    F T R P Y E T T G L N N G G G Y N D R F M K L P S L E S P K S A S M E S H H N T N N N N N M N S N N N N N G D N N E N N
gm053370_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - S P K S M T M - - - - - - - - - - N M F T - - - - - - - - - - - -
 
AT3G61910.1     - - - - Y Q W L I - - - - - - D D Q V N N C - H V S K V M D P - - - - - - - - - - - - - - - - - S F I T S W A A L D R L
gm053372_Glyma1    - - - - - - - - - - - - - - - - - E S D Y C - - - - - - - - - - - - - - - - - - - - - - - - - - G G F T S W E S L D Q L
gm017516_Glyma0    N N N G Y H P M I P V E M G T D N E G S F T T H Q V S G G D P N N N N N N M V H P L E V G S G G G G L T N W A A L D R L
gm053370_Glyma1    - - - - - - - - - - - - - - - - - E S D Y C - - - - - - - - - - - - - - - - - - - - - - - - - - G G F T N W E S L D Q L
 
AT3G61910.1     V A S Q L N G P N S - - - - - Y S I P A V N E T S Q S P Y H G L N - - R S G C N T G L T P - - - D Y Y I P E I D L W N E
gm053372_Glyma1    V A S Q L N G Q T E T Y C S D L Q F P A F L S S S Y I A T - - - - - - T T T T T T H I A P T I Q D Y P S Y D I D L W N -
gm017516_Glyma0    V A S Q L N G Q T D - - - - - - - - - - - - A S R Q L A C A - F N D P T M Y C T T F I N P T T Q D F T S - E I D L W N -
gm053370_Glyma1    V A S Q L N G Q T E T Y C S D L Q F P A F L S S S Y I A - - - - - - - - - - T T T H I A P T I Q D Y P S Y D I D L W N -
 
AT3G61910.1     A D F A R T T - - - - - - - - - - C H L L N G S G
gm053372_Glyma1    - - H C A S - - - - - - - - C P T L Q M - - - - -
gm017516_Glyma0    - - F T R S T S S L L A S S E P L C H V S N T S V
gm053370_Glyma1    - - H C A S R - - - - V S N T P N V T L - - - - -
 
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