fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G61970.1 GEKRLRLFGVDMECG at 215/299 in AT3G61970.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016365 VGKRLRLFGVNMECP in 335/405 AT2G46870.1 1st_not 0.402097902 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G61970.1     MN-------------QEDKE------------------------------------KPIE
pt016365_POPTR_ MNFVGGERGYFDKEEQEEEEAMSSKLPFASPCTSSSSSKYKNFLPEHQNLWPRLFDQPRQ
                **             **::*                                    :* :

AT3G61970.1     E-------------------------------------ASSSMEREHMFDKVVTPSDVGK
pt016365_POPTR_ DSETQEPSLNFVKKLEFMELSLGNNNESESSSTDAGGGASESIEREHMFDKVVTPSDVGK
                :                                     **.*:*****************

AT3G61970.1     LNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGW
pt016365_POPTR_ LNRLVIPKQHAERYFPLDSSS---NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGW
                ******************.*:   .:**********.*:.********************

AT3G61970.1     SRFVKDKKLDAGDIVSFQR--DSCNKDKLYIDWRRRPKIPD-------------HHHQQF
pt016365_POPTR_ SRFVKEKRLYAGDIVSFQRGVGETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHYPQSL
                *****:*:* *********  .. .*.:*:*******: **             *: *.:

AT3G61970.1     AGAMFPRFYTFPHPQMPT--------NY--------ETHNLYHRFHQ-RDLGIG----YY
pt016365_POPTR_ ---RWGRLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPSNISYGNAAQYY
                    : *:*::*:.::*         **        : **  :::**  ::. *    **

AT3G61970.1     VRSMER------------SHPTAVIESVPVMMQRRAQVASMASRGEKRLRLFGVDMECGG
pt016365_POPTR_ LRPPASTLPIGAVHEQGGSHVPVVIDSVPVVHGKTVG---------KRLRLFGVNMEC--
                :*.               ** ..**:****:  : .          ********:***  

AT3G61970.1     GGGSVNSTEEESSSSGGSIPRGRVSMVGAGSL--LQLRLVSSD--------DESLVAMEA
pt016365_POPTR_ ------PTQNDPSSS--------VTMIRHGTLDSLSPRLASSSLPPPFQVREPTGAPMQA
                      .*:::.***        *:*:  *:*  *. **.**.        : : ..*:*

AT3G61970.1     ASLEDHHFFTKKGKPSLSFDLDR
pt016365_POPTR_ E-------FSKKGKASLSFDLDL
                        *:****.*******
BoxShade v3.31 C (beta, 970507) Output
AT3G61970.1     M N - - - - - - - - - - - - - Q E D K E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K P I E
pt016365_POPTR_    M N F V G G E R G Y F D K E E Q E E E E A M S S K L P F A S P C T S S S S S K Y K N F L P E H Q N L W P R L F D Q P R Q
 
AT3G61970.1     E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A S S S M E R E H M F D K V V T P S D V G K
pt016365_POPTR_    D S E T Q E P S L N F V K K L E F M E L S L G N N N E S E S S S T D A G G G A S E S I E R E H M F D K V V T P S D V G K
 
AT3G61970.1     L N R L V I P K Q H A E R Y F P L D N S T T N D S N K G L L L N F E D R S G N S W R F R Y S Y W N S S Q S Y V M T K G W
pt016365_POPTR_    L N R L V I P K Q H A E R Y F P L D S S S - - - N E K G L L L N F E D R N G K P W R F R Y S Y W N S S Q S Y V M T K G W
 
AT3G61970.1     S R F V K D K K L D A G D I V S F Q R - - D S C N K D K L Y I D W R R R P K I P D - - - - - - - - - - - - - H H H Q Q F
pt016365_POPTR_    S R F V K E K R L Y A G D I V S F Q R G V G E T G K H R L F I D W R R R P N A P D P T S F S H L E L Q N Q L H Y P Q S L
 
AT3G61970.1     A G A M F P R F Y T F P H P Q M P T - - - - - - - - N Y - - - - - - - - E T H N L Y H R F H Q - R D L G I G - - - - Y Y
pt016365_POPTR_    - - - R W G R L Y S M P Q S N L P M Q Q P Q L Q H L N Y S I H P Y Q Q H Q H H N H Q Y H Y H Q P S N I S Y G N A A Q Y Y
 
AT3G61970.1     V R S M E R - - - - - - - - - - - - S H P T A V I E S V P V M M Q R R A Q V A S M A S R G E K R L R L F G V D M E C G G
pt016365_POPTR_    L R P P A S T L P I G A V H E Q G G S H V P V V I D S V P V V H G K T V G - - - - - - - - - K R L R L F G V N M E C - -
 
AT3G61970.1     G G G S V N S T E E E S S S S G G S I P R G R V S M V G A G S L - - L Q L R L V S S D - - - - - - - - D E S L V A M E A
pt016365_POPTR_    - - - - - - P T Q N D P S S S - - - - - - - - V T M I R H G T L D S L S P R L A S S S L P P P F Q V R E P T G A P M Q A
 
AT3G61970.1     A S L E D H H F F T K K G K P S L S F D L D R
pt016365_POPTR_    E - - - - - - - F S K K G K A S L S F D L D L
 
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