fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62100.1 RNLSTDLRLGLSFGSS at 33/172 in AT3G62100.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027578 not found in 115aa AT3G62100.1 1st_1st 0.439285714 Ia
Gm002637 DHLRTDLRLGLSISTT in 40/180 AT3G62100.1 not_1st 0.432142857 II
Gm007900 QQLPTDLRLGLGISAT in 35/180 AT2G46990.1 not_not 0.421428571 III
Gm052949 QELPTDLRLGLGISAT in 35/177 AT2G46990.1 not_not 0.421428571 III
Gm045965 TDLSTDLRLGLSISPS in 119/260 AT3G17600.1 not_not 0.403571428 III
Gm035692 TDLSTDLRLGLSISPS in 103/244 AT3G17600.1 not_not 0.4 III
Pt016750 KDLSTDLRLGLSISTS in 37/175 AT3G62100.1 1st_1st 0.489285714 Ia
Pt039254 RDLSTDLRLGLGISTS in 37/174 AT3G62100.1 not_1st 0.464285714 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G62100.1     ------------------------------------------------------------
pt016750_POPTR_ ------------------------------------------------------------
gm052949_Glyma1 ------------------------------------------------------------
pt039254_POPTR_ ------------------------------------------------------------
gm045965_Glyma1 MSPTLMANQNQRECAECLTWLCFLLITLSLSFFLFCFKVASVVCIYKEPKVAAFLFSLDQ
gm027578_Glyma1 ------------------------------------------------------------
gm035692_Glyma1 MSDLAL----------------LLLIILSLSFFLFWYKVASVVYIYKDPKVAVFLFSLDQ
gm007900_Glyma0 ------------------------------------------------------------
gm002637_Glyma0 ------------------------------------------------------------
                                                                            

AT3G62100.1     ------MGR----------GRSSSSSSIESSCKSNPF------GVSSSNTRN------LS
pt016750_POPTR_ ------MGR---------GATSSSSSSFESSNYPSV-------SSKSSLSQLKKD---LS
gm052949_Glyma1 ------MGK----------PASSSSSSISSTTNRHLL-----LSTASSLTQE------LP
pt039254_POPTR_ ------MGR---------GAASSSSSSFESSRYPSV-------SGESSFPHVKRD---LS
gm045965_Glyma1 FHSLEDMGTLEQIDAPQTQSSSSSSSSIDSNNNPSRTRTPPSSSPSSSLCRNRTD---LS
gm027578_Glyma1 ------------------------------------------------------------
gm035692_Glyma1 FHSLEDMGTLEQIDAPQTRSSSSSSSSIDSNNHPSRTRTPPPSSPSSSACRNRTD---LS
gm007900_Glyma0 ------MGK----------PASSSSSSISSTTNRRLL-----ISTASSLTQQ------LP
gm002637_Glyma0 ------MGK----------ASSSSSSSISSCRNPSNY------STASSLTHQHSDQDHLR
                                                                            

AT3G62100.1     TDLRLGLSFGSSSGQY---YNGGDNHEYDGVGAAEEMMIM------EEEEQNECN-SVGS
pt016750_POPTR_ TDLRLGLSISTSQ-QENP-STPSDQQLSDW-PPIKPFL----RKA-LASEENECS--SAT
gm052949_Glyma1 TDLRLGLGISAT--QHFA-SSISRGQ---WQQSHHPFV-NIYSQ--VPAEVNDCSNDHSS
pt039254_POPTR_ TDLRLGLGISTSR-QDNP-STPS-EQLLDW-PPIKPSP----GKA-VTSEENECC--SST
gm045965_Glyma1 TDLRLGLSISPSSQSESPFNSTRREESFDW-PPIKSIL----RST-LVGKQSYLS-QRPS
gm027578_Glyma1 ---------------------------------MQPHLISSFSQA---TEVNDCS-DHTS
gm035692_Glyma1 TDLRLGLSISPSSQSELPFNSTPREESFDW-PPIKSIL----RST-LVGKQSHLS-QRPS
gm007900_Glyma0 TDLRLGLGISAT--QHVA-SSISRGQ---WQQPHHPFVNNNYSQAAASAEVNDCSNDHSS
gm002637_Glyma0 TDLRLGLSISTTHDQHVG-SSSSGGH---W-QPMQPHL-SSFSQA---TEVNHCS-DHTS
                                                  .              : .       :

AT3G62100.1     FYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILW-AEEEDMCSEKSHVLTYAD
pt016750_POPTR_ FFVKVYMEGIPIGRKLNLLAHDGYHDLIQTLDQMFNTSILW-PEMDIEHSGQCHVLTYED
gm052949_Glyma1 FFVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQPERCHVLTYED
pt039254_POPTR_ LFVKVYMEGIQIGRKLNLLAHDGYHDLIQTLDEMFNTSILW-PEMDVEHSGKCHVLTYED
gm045965_Glyma1 LFVKVYMEGIPIGRKLNLMAHYGYDGLVKTLGHMFRTNILC-PNSQPLNSGNFHVLTYED
gm027578_Glyma1 FFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPERCHVLTYED
gm035692_Glyma1 LFVKVYMEGIPIGRKLNLMAHYSYDGLVKTLGHMFRTNILC-PNSQPLNSRNFHVLTYED
gm007900_Glyma0 FFVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQPERCHVLTYED
gm002637_Glyma0 FFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPDRCHVLTYED
                ::*** ***: ****:::::  .*  *: **  ** :.**  .: :   . . ***** *

AT3G62100.1     KEGDWMMVGDVPWEMFLSSVRRLKISRAYHY--
pt016750_POPTR_ KEGDWLIVGDVPWEMFLPSVRRLKITRADSL--
gm052949_Glyma1 EEGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC
pt039254_POPTR_ KEGDWLIVGDVPWEVFLPSVRRLKITRADSL--
gm045965_Glyma1 QEGDWMMVGDVPWEMFLNSVKRLKITRADRC--
gm027578_Glyma1 GEGDLIMVGDVPWEMFLSAVKRLKITRVEAFG-
gm035692_Glyma1 QEGDWMMVGDVPWEMFLNSVKRLKITRADRC--
gm007900_Glyma0 EEGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC
gm002637_Glyma0 GEGDLIMVGDVPWEMFLSAVKRLKITRVETFG-
                 *** ::*******:** :*:****:*.
BoxShade v3.31 C (beta, 970507) Output
AT3G62100.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt016750_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm052949_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt039254_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm045965_Glyma1    M S P T L M A N Q N Q R E C A E C L T W L C F L L I T L S L S F F L F C F K V A S V V C I Y K E P K V A A F L F S L D Q
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm035692_Glyma1    M S D L A L - - - - - - - - - - - - - - - - L L L I I L S L S F F L F W Y K V A S V V Y I Y K D P K V A V F L F S L D Q
gm007900_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm002637_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G62100.1     - - - - - - M G R - - - - - - - - - - G R S S S S S S I E S S C K S N P F - - - - - - G V S S S N T R N - - - - - - L S
pt016750_POPTR_    - - - - - - M G R - - - - - - - - - G A T S S S S S S F E S S N Y P S V - - - - - - - S S K S S L S Q L K K D - - - L S
gm052949_Glyma1    - - - - - - M G K - - - - - - - - - - P A S S S S S S I S S T T N R H L L - - - - - L S T A S S L T Q E - - - - - - L P
pt039254_POPTR_    - - - - - - M G R - - - - - - - - - G A A S S S S S S F E S S R Y P S V - - - - - - - S G E S S F P H V K R D - - - L S
gm045965_Glyma1    F H S L E D M G T L E Q I D A P Q T Q S S S S S S S S I D S N N N P S R T R T P P S S S P S S S L C R N R T D - - - L S
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm035692_Glyma1    F H S L E D M G T L E Q I D A P Q T R S S S S S S S S I D S N N H P S R T R T P P P S S P S S S A C R N R T D - - - L S
gm007900_Glyma0    - - - - - - M G K - - - - - - - - - - P A S S S S S S I S S T T N R R L L - - - - - I S T A S S L T Q Q - - - - - - L P
gm002637_Glyma0    - - - - - - M G K - - - - - - - - - - A S S S S S S S I S S C R N P S N Y - - - - - - S T A S S L T H Q H S D Q D H L R
 
AT3G62100.1     T D L R L G L S F G S S S G Q Y - - - Y N G G D N H E Y D G V G A A E E M M I M - - - - - - E E E E Q N E C N - S V G S
pt016750_POPTR_    T D L R L G L S I S T S Q - Q E N P - S T P S D Q Q L S D W - P P I K P F L - - - - R K A - L A S E E N E C S - - S A T
gm052949_Glyma1    T D L R L G L G I S A T - - Q H F A - S S I S R G Q - - - W Q Q S H H P F V - N I Y S Q - - V P A E V N D C S N D H S S
pt039254_POPTR_    T D L R L G L G I S T S R - Q D N P - S T P S - E Q L L D W - P P I K P S P - - - - G K A - V T S E E N E C C - - S S T
gm045965_Glyma1    T D L R L G L S I S P S S Q S E S P F N S T R R E E S F D W - P P I K S I L - - - - R S T - L V G K Q S Y L S - Q R P S
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q P H L I S S F S Q A - - - T E V N D C S - D H T S
gm035692_Glyma1    T D L R L G L S I S P S S Q S E L P F N S T P R E E S F D W - P P I K S I L - - - - R S T - L V G K Q S H L S - Q R P S
gm007900_Glyma0    T D L R L G L G I S A T - - Q H V A - S S I S R G Q - - - W Q Q P H H P F V N N N Y S Q A A A S A E V N D C S N D H S S
gm002637_Glyma0    T D L R L G L S I S T T H D Q H V G - S S S S G G H - - - W - Q P M Q P H L - S S F S Q A - - - T E V N H C S - D H T S
 
AT3G62100.1     F Y V K V N M E G V P I G R K I D L L S L N G Y H D L I T T L D Y M F N A S I L W - A E E E D M C S E K S H V L T Y A D
pt016750_POPTR_    F F V K V Y M E G I P I G R K L N L L A H D G Y H D L I Q T L D Q M F N T S I L W - P E M D I E H S G Q C H V L T Y E D
gm052949_Glyma1    F F V K V Y M E G I P I G R K L N I L A H G G Y Y E L V R T L E H M F D T T I L W G T E M N G V Q P E R C H V L T Y E D
pt039254_POPTR_    L F V K V Y M E G I Q I G R K L N L L A H D G Y H D L I Q T L D E M F N T S I L W - P E M D V E H S G K C H V L T Y E D
gm045965_Glyma1    L F V K V Y M E G I P I G R K L N L M A H Y G Y D G L V K T L G H M F R T N I L C - P N S Q P L N S G N F H V L T Y E D
gm027578_Glyma1    F F V K V Y M E G I P I G R K L N L L A H D G Y H E L V K T L E Q M F D T T I L W G T E M D G V Q P E R C H V L T Y E D
gm035692_Glyma1    L F V K V Y M E G I P I G R K L N L M A H Y S Y D G L V K T L G H M F R T N I L C - P N S Q P L N S R N F H V L T Y E D
gm007900_Glyma0    F F V K V Y M E G I P I G R K L N I L A H G G Y Y E L V R T L E H M F D T T I L W G T E M N G V Q P E R C H V L T Y E D
gm002637_Glyma0    F F V K V Y M E G I P I G R K L N L L A H D G Y H E L V K T L E Q M F D T T I L W G T E M D G V Q P D R C H V L T Y E D
 
AT3G62100.1     K E G D W M M V G D V P W E M F L S S V R R L K I S R A Y H Y - -
pt016750_POPTR_    K E G D W L I V G D V P W E M F L P S V R R L K I T R A D S L - -
gm052949_Glyma1    E E G D L V M V G D V P W E M F L S T V K R L K I T R V D T F G C
pt039254_POPTR_    K E G D W L I V G D V P W E V F L P S V R R L K I T R A D S L - -
gm045965_Glyma1    Q E G D W M M V G D V P W E M F L N S V K R L K I T R A D R C - -
gm027578_Glyma1    G E G D L I M V G D V P W E M F L S A V K R L K I T R V E A F G -
gm035692_Glyma1    Q E G D W M M V G D V P W E M F L N S V K R L K I T R A D R C - -
gm007900_Glyma0    E E G D L V M V G D V P W E M F L S T V K R L K I T R V D T F G C
gm002637_Glyma0    G E G D L I M V G D V P W E M F L S A V K R L K I T R V E T F G -
 
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