Input
| Putative repression domain
|
|
AT3G62100.1 |
RNLSTDLRLGLSFGSS at 33/172 in AT3G62100.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm007900 |
QQLPTDLRLGLGISAT in 35/180 |
AT2G46990.1 |
not_not |
0.421428571 |
III |
Gm052949 |
QELPTDLRLGLGISAT in 35/177 |
AT2G46990.1 |
not_not |
0.421428571 |
III |
Gm045965 |
TDLSTDLRLGLSISPS in 119/260 |
AT3G17600.1 |
not_not |
0.403571428 |
III |
Gm035692 |
TDLSTDLRLGLSISPS in 103/244 |
AT3G17600.1 |
not_not |
0.4 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT3G62100.1 ------------------------------------------------------------
gm045965_Glyma1 MSPTLMANQNQRECAECLTWLCFLLITLSLSFFLFCFKVASVVCIYKEPKVAAFLFSLDQ
gm035692_Glyma1 MSDLAL----------------LLLIILSLSFFLFWYKVASVVYIYKDPKVAVFLFSLDQ
gm007900_Glyma0 ------------------------------------------------------------
gm052949_Glyma1 ------------------------------------------------------------
AT3G62100.1 ------MG----------RGRSSSSSSIESS-----CKSNPF-GVSSSNTRN---LSTDL
gm045965_Glyma1 FHSLEDMGTLEQIDAPQTQSSSSSSSSIDSNNNPSRTRTPPSSSPSSSLCRNRTDLSTDL
gm035692_Glyma1 FHSLEDMGTLEQIDAPQTRSSSSSSSSIDSNNHPSRTRTPPPSSPSSSACRNRTDLSTDL
gm007900_Glyma0 ------MG----------KPASSSSSSISST-----TNRRLLISTASSLTQQ---LPTDL
gm052949_Glyma1 ------MG----------KPASSSSSSISST-----TNRHLLLSTASSLTQE---LPTDL
** : *******.*. . . :** :: *.***
AT3G62100.1 RLGLSFGS--------SSGQYYNGGD---NHEYDGVGAAEEMMIMEEEEQNEC-NSVGSF
gm045965_Glyma1 RLGLSISP-----SSQSESPFNSTRR---EESFDWPPIKSILRSTLVGKQSYL-SQRPSL
gm035692_Glyma1 RLGLSISP-----SSQSELPFNSTPR---EESFDWPPIKSILRSTLVGKQSHL-SQRPSL
gm007900_Glyma0 RLGLGISATQHVASSISRGQWQQPHHPFVNNNYSQAAASAEV--------NDCSNDHSSF
gm052949_Glyma1 RLGLGISATQHFASSISRGQWQQSHHPFV-NIYSQ--VPAEV--------NDCSNDHSSF
****.:.. * : . . :. : . .. *:
AT3G62100.1 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEED-MCSEKSHVLTYADK
gm045965_Glyma1 FVKVYMEGIPIGRKLNLMAHYGYDGLVKTLGHMFRTNILCPNSQP-LNSGNFHVLTYEDQ
gm035692_Glyma1 FVKVYMEGIPIGRKLNLMAHYSYDGLVKTLGHMFRTNILCPNSQP-LNSRNFHVLTYEDQ
gm007900_Glyma0 FVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQPERCHVLTYEDE
gm052949_Glyma1 FVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQPERCHVLTYEDE
:*** ***:*****::::: .* *: ** :** :.** . : . . ***** *:
AT3G62100.1 EGDWMMVGDVPWEMFLSSVRRLKISRAYHY--
gm045965_Glyma1 EGDWMMVGDVPWEMFLNSVKRLKITRADRC--
gm035692_Glyma1 EGDWMMVGDVPWEMFLNSVKRLKITRADRC--
gm007900_Glyma0 EGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC
gm052949_Glyma1 EGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC
*** :***********.:*:****:*.
BoxShade v3.31 C (beta, 970507) Output
AT3G62100.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
gm045965_Glyma1 |
M |
S |
P |
T |
L |
M |
A |
N |
Q |
N |
Q |
R |
E |
C |
A |
E |
C |
L |
T |
W |
L |
C |
F |
L |
L |
I |
T |
L |
S |
L |
S |
F |
F |
L |
F |
C |
F |
K |
V |
A |
S |
V |
V |
C |
I |
Y |
K |
E |
P |
K |
V |
A |
A |
F |
L |
F |
S |
L |
D |
Q |
gm035692_Glyma1 |
M |
S |
D |
L |
A |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
L |
L |
L |
I |
I |
L |
S |
L |
S |
F |
F |
L |
F |
W |
Y |
K |
V |
A |
S |
V |
V |
Y |
I |
Y |
K |
D |
P |
K |
V |
A |
V |
F |
L |
F |
S |
L |
D |
Q |
gm007900_Glyma0 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
gm052949_Glyma1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT3G62100.1 |
- |
- |
- |
- |
- |
- |
M |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
G |
R |
S |
S |
S |
S |
S |
S |
I |
E |
S |
S |
- |
- |
- |
- |
- |
C |
K |
S |
N |
P |
F |
- |
G |
V |
S |
S |
S |
N |
T |
R |
N |
- |
- |
- |
L |
S |
T |
D |
L |
gm045965_Glyma1 |
F |
H |
S |
L |
E |
D |
M |
G |
T |
L |
E |
Q |
I |
D |
A |
P |
Q |
T |
Q |
S |
S |
S |
S |
S |
S |
S |
S |
I |
D |
S |
N |
N |
N |
P |
S |
R |
T |
R |
T |
P |
P |
S |
S |
S |
P |
S |
S |
S |
L |
C |
R |
N |
R |
T |
D |
L |
S |
T |
D |
L |
gm035692_Glyma1 |
F |
H |
S |
L |
E |
D |
M |
G |
T |
L |
E |
Q |
I |
D |
A |
P |
Q |
T |
R |
S |
S |
S |
S |
S |
S |
S |
S |
I |
D |
S |
N |
N |
H |
P |
S |
R |
T |
R |
T |
P |
P |
P |
S |
S |
P |
S |
S |
S |
A |
C |
R |
N |
R |
T |
D |
L |
S |
T |
D |
L |
gm007900_Glyma0 |
- |
- |
- |
- |
- |
- |
M |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
K |
P |
A |
S |
S |
S |
S |
S |
S |
I |
S |
S |
T |
- |
- |
- |
- |
- |
T |
N |
R |
R |
L |
L |
I |
S |
T |
A |
S |
S |
L |
T |
Q |
Q |
- |
- |
- |
L |
P |
T |
D |
L |
gm052949_Glyma1 |
- |
- |
- |
- |
- |
- |
M |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
K |
P |
A |
S |
S |
S |
S |
S |
S |
I |
S |
S |
T |
- |
- |
- |
- |
- |
T |
N |
R |
H |
L |
L |
L |
S |
T |
A |
S |
S |
L |
T |
Q |
E |
- |
- |
- |
L |
P |
T |
D |
L |
|
AT3G62100.1 |
R |
L |
G |
L |
S |
F |
G |
S |
- |
- |
- |
- |
- |
- |
- |
- |
S |
S |
G |
Q |
Y |
Y |
N |
G |
G |
D |
- |
- |
- |
N |
H |
E |
Y |
D |
G |
V |
G |
A |
A |
E |
E |
M |
M |
I |
M |
E |
E |
E |
E |
Q |
N |
E |
C |
- |
N |
S |
V |
G |
S |
F |
gm045965_Glyma1 |
R |
L |
G |
L |
S |
I |
S |
P |
- |
- |
- |
- |
- |
S |
S |
Q |
S |
E |
S |
P |
F |
N |
S |
T |
R |
R |
- |
- |
- |
E |
E |
S |
F |
D |
W |
P |
P |
I |
K |
S |
I |
L |
R |
S |
T |
L |
V |
G |
K |
Q |
S |
Y |
L |
- |
S |
Q |
R |
P |
S |
L |
gm035692_Glyma1 |
R |
L |
G |
L |
S |
I |
S |
P |
- |
- |
- |
- |
- |
S |
S |
Q |
S |
E |
L |
P |
F |
N |
S |
T |
P |
R |
- |
- |
- |
E |
E |
S |
F |
D |
W |
P |
P |
I |
K |
S |
I |
L |
R |
S |
T |
L |
V |
G |
K |
Q |
S |
H |
L |
- |
S |
Q |
R |
P |
S |
L |
gm007900_Glyma0 |
R |
L |
G |
L |
G |
I |
S |
A |
T |
Q |
H |
V |
A |
S |
S |
I |
S |
R |
G |
Q |
W |
Q |
Q |
P |
H |
H |
P |
F |
V |
N |
N |
N |
Y |
S |
Q |
A |
A |
A |
S |
A |
E |
V |
- |
- |
- |
- |
- |
- |
- |
- |
N |
D |
C |
S |
N |
D |
H |
S |
S |
F |
gm052949_Glyma1 |
R |
L |
G |
L |
G |
I |
S |
A |
T |
Q |
H |
F |
A |
S |
S |
I |
S |
R |
G |
Q |
W |
Q |
Q |
S |
H |
H |
P |
F |
V |
- |
N |
I |
Y |
S |
Q |
- |
- |
V |
P |
A |
E |
V |
- |
- |
- |
- |
- |
- |
- |
- |
N |
D |
C |
S |
N |
D |
H |
S |
S |
F |
|
AT3G62100.1 |
Y |
V |
K |
V |
N |
M |
E |
G |
V |
P |
I |
G |
R |
K |
I |
D |
L |
L |
S |
L |
N |
G |
Y |
H |
D |
L |
I |
T |
T |
L |
D |
Y |
M |
F |
N |
A |
S |
I |
L |
W |
A |
E |
E |
E |
D |
- |
M |
C |
S |
E |
K |
S |
H |
V |
L |
T |
Y |
A |
D |
K |
gm045965_Glyma1 |
F |
V |
K |
V |
Y |
M |
E |
G |
I |
P |
I |
G |
R |
K |
L |
N |
L |
M |
A |
H |
Y |
G |
Y |
D |
G |
L |
V |
K |
T |
L |
G |
H |
M |
F |
R |
T |
N |
I |
L |
C |
P |
N |
S |
Q |
P |
- |
L |
N |
S |
G |
N |
F |
H |
V |
L |
T |
Y |
E |
D |
Q |
gm035692_Glyma1 |
F |
V |
K |
V |
Y |
M |
E |
G |
I |
P |
I |
G |
R |
K |
L |
N |
L |
M |
A |
H |
Y |
S |
Y |
D |
G |
L |
V |
K |
T |
L |
G |
H |
M |
F |
R |
T |
N |
I |
L |
C |
P |
N |
S |
Q |
P |
- |
L |
N |
S |
R |
N |
F |
H |
V |
L |
T |
Y |
E |
D |
Q |
gm007900_Glyma0 |
F |
V |
K |
V |
Y |
M |
E |
G |
I |
P |
I |
G |
R |
K |
L |
N |
I |
L |
A |
H |
G |
G |
Y |
Y |
E |
L |
V |
R |
T |
L |
E |
H |
M |
F |
D |
T |
T |
I |
L |
W |
G |
T |
E |
M |
N |
G |
V |
Q |
P |
E |
R |
C |
H |
V |
L |
T |
Y |
E |
D |
E |
gm052949_Glyma1 |
F |
V |
K |
V |
Y |
M |
E |
G |
I |
P |
I |
G |
R |
K |
L |
N |
I |
L |
A |
H |
G |
G |
Y |
Y |
E |
L |
V |
R |
T |
L |
E |
H |
M |
F |
D |
T |
T |
I |
L |
W |
G |
T |
E |
M |
N |
G |
V |
Q |
P |
E |
R |
C |
H |
V |
L |
T |
Y |
E |
D |
E |
|
AT3G62100.1 |
E |
G |
D |
W |
M |
M |
V |
G |
D |
V |
P |
W |
E |
M |
F |
L |
S |
S |
V |
R |
R |
L |
K |
I |
S |
R |
A |
Y |
H |
Y |
- |
- |
gm045965_Glyma1 |
E |
G |
D |
W |
M |
M |
V |
G |
D |
V |
P |
W |
E |
M |
F |
L |
N |
S |
V |
K |
R |
L |
K |
I |
T |
R |
A |
D |
R |
C |
- |
- |
gm035692_Glyma1 |
E |
G |
D |
W |
M |
M |
V |
G |
D |
V |
P |
W |
E |
M |
F |
L |
N |
S |
V |
K |
R |
L |
K |
I |
T |
R |
A |
D |
R |
C |
- |
- |
gm007900_Glyma0 |
E |
G |
D |
L |
V |
M |
V |
G |
D |
V |
P |
W |
E |
M |
F |
L |
S |
T |
V |
K |
R |
L |
K |
I |
T |
R |
V |
D |
T |
F |
G |
C |
gm052949_Glyma1 |
E |
G |
D |
L |
V |
M |
V |
G |
D |
V |
P |
W |
E |
M |
F |
L |
S |
T |
V |
K |
R |
L |
K |
I |
T |
R |
V |
D |
T |
F |
G |
C |
|
|