fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62100.1 RNLSTDLRLGLSFGSS at 33/172 in AT3G62100.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027578 not found in 115aa AT3G62100.1 1st_1st 0.439285714 Ia
Gm002637 DHLRTDLRLGLSISTT in 40/180 AT3G62100.1 not_1st 0.432142857 II
Gm007900 QQLPTDLRLGLGISAT in 35/180 AT2G46990.1 not_not 0.421428571 III
Gm052949 QELPTDLRLGLGISAT in 35/177 AT2G46990.1 not_not 0.421428571 III
Gm045965 TDLSTDLRLGLSISPS in 119/260 AT3G17600.1 not_not 0.403571428 III
Gm035692 TDLSTDLRLGLSISPS in 103/244 AT3G17600.1 not_not 0.4 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G62100.1     ------------------------------------------------------------
gm002637_Glyma0 ------------------------------------------------------------
gm035692_Glyma1 MSDLAL----------------LLLIILSLSFFLFWYKVASVVYIYKDPKVAVFLFSLDQ
gm045965_Glyma1 MSPTLMANQNQRECAECLTWLCFLLITLSLSFFLFCFKVASVVCIYKEPKVAAFLFSLDQ
gm052949_Glyma1 ------------------------------------------------------------
gm007900_Glyma0 ------------------------------------------------------------
gm027578_Glyma1 ------------------------------------------------------------
                                                                            

AT3G62100.1     ------MG----------RGRSSSSSSIESSCKSNPF------GVSSSNTRN------LS
gm002637_Glyma0 ------MG----------KASSSSSSSISSCRNPSNY------STASSLTHQHSDQDHLR
gm035692_Glyma1 FHSLEDMGTLEQIDAPQTRSSSSSSSSIDSNNHPSRTRTPPPSSPSSSACRNRTD---LS
gm045965_Glyma1 FHSLEDMGTLEQIDAPQTQSSSSSSSSIDSNNNPSRTRTPPSSSPSSSLCRNRTD---LS
gm052949_Glyma1 ------MG----------KPASSSSSSISSTTNRHLL-----LSTASSLTQE------LP
gm007900_Glyma0 ------MG----------KPASSSSSSISSTTNRRLL-----ISTASSLTQQ------LP
gm027578_Glyma1 ------------------------------------------------------------
                                                                            

AT3G62100.1     TDLRLGLSFGSS----------SGQYYNGGDNHEYDGVGAAEE---------MMIMEEEE
gm002637_Glyma0 TDLRLGLSISTTHDQHVGSSSSGGHW-QPMQPHL-SSFSQA-----------------TE
gm035692_Glyma1 TDLRLGLSISPSS--------------QSELPF--NSTPREESFDWPPIKSILRSTLVGK
gm045965_Glyma1 TDLRLGLSISPSS--------------QSESPF--NSTRREESFDWPPIKSILRSTLVGK
gm052949_Glyma1 TDLRLGLGISAT--QHFASSISRGQWQQSHHPFV-NIYSQ----------------VPAE
gm007900_Glyma0 TDLRLGLGISAT--QHVASSISRGQWQQPHHPFVNNNYSQAA--------------ASAE
gm027578_Glyma1 -----------------------------MQPHLISSFSQA-----------------TE
                                                .  .                       :

AT3G62100.1     QNECN-SVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEED-MCS
gm002637_Glyma0 VNHCS-DHTSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQP
gm035692_Glyma1 QSHLS-QRPSLFVKVYMEGIPIGRKLNLMAHYSYDGLVKTLGHMFRTNILCPNSQP-LNS
gm045965_Glyma1 QSYLS-QRPSLFVKVYMEGIPIGRKLNLMAHYGYDGLVKTLGHMFRTNILCPNSQP-LNS
gm052949_Glyma1 VNDCSNDHSSFFVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQP
gm007900_Glyma0 VNDCSNDHSSFFVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQP
gm027578_Glyma1 VNDCS-DHTSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQP
                 .  . .  *::*** ***:*****:::::  .*  *: **  ** :.**   .   : .

AT3G62100.1     EKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISRAYHY--
gm002637_Glyma0 DRCHVLTYEDGEGDLIMVGDVPWEMFLSAVKRLKITRVETFG-
gm035692_Glyma1 RNFHVLTYEDQEGDWMMVGDVPWEMFLNSVKRLKITRADRC--
gm045965_Glyma1 GNFHVLTYEDQEGDWMMVGDVPWEMFLNSVKRLKITRADRC--
gm052949_Glyma1 ERCHVLTYEDEEGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC
gm007900_Glyma0 ERCHVLTYEDEEGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC
gm027578_Glyma1 ERCHVLTYEDGEGDLIMVGDVPWEMFLSAVKRLKITRVEAFG-
                 . ***** * *** :***********.:*:****:*.
BoxShade v3.31 C (beta, 970507) Output
AT3G62100.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm002637_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm035692_Glyma1    M S D L A L - - - - - - - - - - - - - - - - L L L I I L S L S F F L F W Y K V A S V V Y I Y K D P K V A V F L F S L D Q
gm045965_Glyma1    M S P T L M A N Q N Q R E C A E C L T W L C F L L I T L S L S F F L F C F K V A S V V C I Y K E P K V A A F L F S L D Q
gm052949_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm007900_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G62100.1     - - - - - - M G - - - - - - - - - - R G R S S S S S S I E S S C K S N P F - - - - - - G V S S S N T R N - - - - - - L S
gm002637_Glyma0    - - - - - - M G - - - - - - - - - - K A S S S S S S S I S S C R N P S N Y - - - - - - S T A S S L T H Q H S D Q D H L R
gm035692_Glyma1    F H S L E D M G T L E Q I D A P Q T R S S S S S S S S I D S N N H P S R T R T P P P S S P S S S A C R N R T D - - - L S
gm045965_Glyma1    F H S L E D M G T L E Q I D A P Q T Q S S S S S S S S I D S N N N P S R T R T P P S S S P S S S L C R N R T D - - - L S
gm052949_Glyma1    - - - - - - M G - - - - - - - - - - K P A S S S S S S I S S T T N R H L L - - - - - L S T A S S L T Q E - - - - - - L P
gm007900_Glyma0    - - - - - - M G - - - - - - - - - - K P A S S S S S S I S S T T N R R L L - - - - - I S T A S S L T Q Q - - - - - - L P
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G62100.1     T D L R L G L S F G S S - - - - - - - - - - S G Q Y Y N G G D N H E Y D G V G A A E E - - - - - - - - - M M I M E E E E
gm002637_Glyma0    T D L R L G L S I S T T H D Q H V G S S S S G G H W - Q P M Q P H L - S S F S Q A - - - - - - - - - - - - - - - - - T E
gm035692_Glyma1    T D L R L G L S I S P S S - - - - - - - - - - - - - - Q S E L P F - - N S T P R E E S F D W P P I K S I L R S T L V G K
gm045965_Glyma1    T D L R L G L S I S P S S - - - - - - - - - - - - - - Q S E S P F - - N S T R R E E S F D W P P I K S I L R S T L V G K
gm052949_Glyma1    T D L R L G L G I S A T - - Q H F A S S I S R G Q W Q Q S H H P F V - N I Y S Q - - - - - - - - - - - - - - - - V P A E
gm007900_Glyma0    T D L R L G L G I S A T - - Q H V A S S I S R G Q W Q Q P H H P F V N N N Y S Q A A - - - - - - - - - - - - - - A S A E
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q P H L I S S F S Q A - - - - - - - - - - - - - - - - - T E
 
AT3G62100.1     Q N E C N - S V G S F Y V K V N M E G V P I G R K I D L L S L N G Y H D L I T T L D Y M F N A S I L W A E E E D - M C S
gm002637_Glyma0    V N H C S - D H T S F F V K V Y M E G I P I G R K L N L L A H D G Y H E L V K T L E Q M F D T T I L W G T E M D G V Q P
gm035692_Glyma1    Q S H L S - Q R P S L F V K V Y M E G I P I G R K L N L M A H Y S Y D G L V K T L G H M F R T N I L C P N S Q P - L N S
gm045965_Glyma1    Q S Y L S - Q R P S L F V K V Y M E G I P I G R K L N L M A H Y G Y D G L V K T L G H M F R T N I L C P N S Q P - L N S
gm052949_Glyma1    V N D C S N D H S S F F V K V Y M E G I P I G R K L N I L A H G G Y Y E L V R T L E H M F D T T I L W G T E M N G V Q P
gm007900_Glyma0    V N D C S N D H S S F F V K V Y M E G I P I G R K L N I L A H G G Y Y E L V R T L E H M F D T T I L W G T E M N G V Q P
gm027578_Glyma1    V N D C S - D H T S F F V K V Y M E G I P I G R K L N L L A H D G Y H E L V K T L E Q M F D T T I L W G T E M D G V Q P
 
AT3G62100.1     E K S H V L T Y A D K E G D W M M V G D V P W E M F L S S V R R L K I S R A Y H Y - -
gm002637_Glyma0    D R C H V L T Y E D G E G D L I M V G D V P W E M F L S A V K R L K I T R V E T F G -
gm035692_Glyma1    R N F H V L T Y E D Q E G D W M M V G D V P W E M F L N S V K R L K I T R A D R C - -
gm045965_Glyma1    G N F H V L T Y E D Q E G D W M M V G D V P W E M F L N S V K R L K I T R A D R C - -
gm052949_Glyma1    E R C H V L T Y E D E E G D L V M V G D V P W E M F L S T V K R L K I T R V D T F G C
gm007900_Glyma0    E R C H V L T Y E D E E G D L V M V G D V P W E M F L S T V K R L K I T R V D T F G C
gm027578_Glyma1    E R C H V L T Y E D G E G D L I M V G D V P W E M F L S A V K R L K I T R V E A F G -
 
0