fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os020000 not found in 148aa AT3G62420.1 1st_1st 0.380622837 Ib
Sb031746 not found in 450aa AT3G62420.1 1st_1st 0.380622837 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G62420.1     ----------MGSLQMQTSPESDNDPRYATVTDERKRKRMISNRESA-------------
Os020000_Os05t0 ----------MSSPSRRSSSPESNTSGGGGGADERKRKRMLSNRESA-------------
Sb031746_Sorbi1 FSKAARVNVIMCRDAANSSCLVANQPAPAACLPDSKQSSVVEHVRGADGHGGGGVAGQLP
                          *     .:*    * .  .    : *:. ::.: ..*             

AT3G62420.1     -RRSRMRKQKQL--------GDLINEVTLLKNDNAKITEQVDEASKKYIEMESKNNVL--
Os020000_Os05t0 -RRSRARKQQRL--------EELIAEAARLQAENARVEAQIGAYAGELSKVDGENAVL--
Sb031746_Sorbi1 GAEKRVVGGHHLVLDVHGDAAEVLDDAEHI-VDGAEAVAELGGAGAEHGVLLVDARVLGR
                  ..*    ::*         ::: :.  :  :.*.   ::.  . :   :  .  **  

AT3G62420.1     ---RAQASELTDRLRSLNSVLEMVEEISGQALDIPEIPES--------------------
Os020000_Os05t0 ---RARHGELAGRLQALGSVLEIL-QVAGAPVDIPEIPDDP-------------------
Sb031746_Sorbi1 DVGGARRDARVLGLQARHLLHQLV-----QVLLLPQ-PRPPRRLAVRQPPLLAPVRVRRR
                    *: .  .  *::   : :::       : :*: *                      

AT3G62420.1     ----MQNPWQMPCPMQ------------------P--------IRAS-------------
Os020000_Os05t0 ----LLRPWQPPFAAQ------------------P--------IVATA------------
Sb031746_Sorbi1 RRVAVRRPGRPPRPRRRQRRRRHQAYLQKDPLPLPLLQLLLFIIRESKEGRRGWEKGESR
                    : .* : * . :                  *        *  :             

AT3G62420.1     -----ADMFDC--
Os020000_Os05t0 ----MADAFQF--
Sb031746_Sorbi1 TGEGMADPGEGKL
                     **  :
BoxShade v3.31 C (beta, 970507) Output
AT3G62420.1     - - - - - - - - - - M G S L Q M Q T S P E S D N D P R Y A T V T D E R K R K R M I S N R E S A - - - - - - - - - - - - -
Os020000_Os05t0    - - - - - - - - - - M S S P S R R S S S P E S N T S G G G G G A D E R K R K R M L S N R E S A - - - - - - - - - - - - -
Sb031746_Sorbi1    F S K A A R V N V I M C R D A A N S S C L V A N Q P A P A A C L P D S K Q S S V V E H V R G A D G H G G G G V A G Q L P
 
AT3G62420.1     - R R S R M R K Q K Q L - - - - - - - - G D L I N E V T L L K N D N A K I T E Q V D E A S K K Y I E M E S K N N V L - -
Os020000_Os05t0    - R R S R A R K Q Q R L - - - - - - - - E E L I A E A A R L Q A E N A R V E A Q I G A Y A G E L S K V D G E N A V L - -
Sb031746_Sorbi1    G A E K R V V G G H H L V L D V H G D A A E V L D D A E H I - V D G A E A V A E L G G A G A E H G V L L V D A R V L G R
 
AT3G62420.1     - - - R A Q A S E L T D R L R S L N S V L E M V E E I S G Q A L D I P E I P E S - - - - - - - - - - - - - - - - - - - -
Os020000_Os05t0    - - - R A R H G E L A G R L Q A L G S V L E I L - Q V A G A P V D I P E I P D D P - - - - - - - - - - - - - - - - - - -
Sb031746_Sorbi1    D V G G A R R D A R V L G L Q A R H L L H Q L V - - - - - Q V L L L P Q - P R P P R R L A V R Q P P L L A P V R V R R R
 
AT3G62420.1     - - - - M Q N P W Q M P C P M Q - - - - - - - - - - - - - - - - - - P - - - - - - - - I R A S - - - - - - - - - - - - -
Os020000_Os05t0    - - - - L L R P W Q P P F A A Q - - - - - - - - - - - - - - - - - - P - - - - - - - - I V A T A - - - - - - - - - - - -
Sb031746_Sorbi1    R R V A V R R P G R P P R P R R R Q R R R R H Q A Y L Q K D P L P L P L L Q L L L F I I R E S K E G R R G W E K G E S R
 
AT3G62420.1     - - - - - A D M F D C - -
Os020000_Os05t0    - - - - M A D A F Q F - -
Sb031746_Sorbi1    T G E G M A D P G E G K L
 
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