fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016120 not found in 139aa AT3G62420.1 not_1st 0.557093425 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G62420.1     MGSLQMQTSPESDNDPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKN
pt016120_POPTR_ MSARQAASS-GSDSDPRYANV-DERKRKRMISNRDSARRSRMRKQKQMEDLVNEVSKLQN
                *.: *  :*  **.*****.* ************:************: **:***: *:*

AT3G62420.1     DNAKITEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPEI
pt016120_POPTR_ ENNQLMQGINVAQQRYMEMESANNVLRAQAVELTERLRSLNSVLQIVEDVSGLSVEIPEI
                :* :: : :: *.::*:**** ******** ***:*********::**::** :::****

AT3G62420.1     PESMQNPWQMPCPMQPIRASADMFD-C
pt016120_POPTR_ PDPLFKPWAAPV------FSTAYYDIC
                *:.: :**  *        *:  :* *
BoxShade v3.31 C (beta, 970507) Output
AT3G62420.1     M G S L Q M Q T S P E S D N D P R Y A T V T D E R K R K R M I S N R E S A R R S R M R K Q K Q L G D L I N E V T L L K N
pt016120_POPTR_    M S A R Q A A S S - G S D S D P R Y A N V - D E R K R K R M I S N R D S A R R S R M R K Q K Q M E D L V N E V S K L Q N
 
AT3G62420.1     D N A K I T E Q V D E A S K K Y I E M E S K N N V L R A Q A S E L T D R L R S L N S V L E M V E E I S G Q A L D I P E I
pt016120_POPTR_    E N N Q L M Q G I N V A Q Q R Y M E M E S A N N V L R A Q A V E L T E R L R S L N S V L Q I V E D V S G L S V E I P E I
 
AT3G62420.1     P E S M Q N P W Q M P C P M Q P I R A S A D M F D - C
pt016120_POPTR_    P D P L F K P W A A P V - - - - - - F S T A Y Y D I C
 
0