fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os020000 not found in 148aa AT3G62420.1 1st_1st 0.380622837 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G62420.1     MGSLQMQTSPESDNDPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKN
Os020000_Os05t0 MSSPSRRSSSPESNTSGGGGGADERKRKRMLSNRESARRSRARKQQRLEELIAEAARLQA
                *.* . ::*. ..* .  .  :********:********** ***::* :** *.: *: 

AT3G62420.1     DNAKITEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPEI
Os020000_Os05t0 ENARVEAQIGAYAGELSKVDGENAVLRARHGELAGRLQALGSVLEIL-QVAGAPVDIPEI
                :**::  *:.  : :  :::.:* ****: .**:.**::*.****:: :::* .:*****

AT3G62420.1     PES-MQNPWQMPCPMQPIRAS--ADMFDC
Os020000_Os05t0 PDDPLLRPWQPPFAAQPIVATAMADAFQF
                *:. : .*** * . *** *:  ** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G62420.1     M G S L Q M Q T S P E S D N D P R Y A T V T D E R K R K R M I S N R E S A R R S R M R K Q K Q L G D L I N E V T L L K N
Os020000_Os05t0    M S S P S R R S S S P E S N T S G G G G G A D E R K R K R M L S N R E S A R R S R A R K Q Q R L E E L I A E A A R L Q A
 
AT3G62420.1     D N A K I T E Q V D E A S K K Y I E M E S K N N V L R A Q A S E L T D R L R S L N S V L E M V E E I S G Q A L D I P E I
Os020000_Os05t0    E N A R V E A Q I G A Y A G E L S K V D G E N A V L R A R H G E L A G R L Q A L G S V L E I L - Q V A G A P V D I P E I
 
AT3G62420.1     P E S - M Q N P W Q M P C P M Q P I R A S - - A D M F D C
Os020000_Os05t0    P D D P L L R P W Q P P F A A Q P I V A T A M A D A F Q F
 
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