fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031746 not found in 450aa AT3G62420.1 1st_1st 0.380622837 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G62420.1     ----------MGSLQMQTSPESDNDPRYATVTDERKRKRMISNRESA-------------
Sb031746_Sorbi1 FSKAARVNVIMCRDAANSSCLVANQPAPAACLPDSKQSSVVEHVRGADGHGGGGVAGQLP
                          *     ::*    *:*  *:   : *:. ::.: ..*             

AT3G62420.1     -RRSRMRKQKQLGDLINEVTLLKNDNAKI---TEQVDEASKKYIEM--------------
Sb031746_Sorbi1 GAEKRVVGGHHL------VLDVHGDAAEVLDDAEHIVDGAEAVAELGGAGAEHGVLLVDA
                  ..*:   ::*      *  ::.* *::   :*:: :.::   *:              

AT3G62420.1     ----------ESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPEIP--------
Sb031746_Sorbi1 RVLGRDVGGARRDARVLGLQARHL---LHQLVQVLLLPQPRPPRRLAVRQPPLLAPVRVR
                          . . .**  ** .*   *:.* .** : :  . : * : : *        

AT3G62420.1     ----ESMQNPWQMPCPMQ------------------PI----------------------
Sb031746_Sorbi1 RRRRVAVRRPGRPPRPRRRQRRRRHQAYLQKDPLPLPLLQLLLFIIRESKEGRRGWEKGE
                     :::.* : * * :                  *:                      

AT3G62420.1     -RASADMFDC-----
Sb031746_Sorbi1 SRTGEGMADPGEGKL
                 *:. .* *
BoxShade v3.31 C (beta, 970507) Output
AT3G62420.1     - - - - - - - - - - M G S L Q M Q T S P E S D N D P R Y A T V T D E R K R K R M I S N R E S A - - - - - - - - - - - - -
Sb031746_Sorbi1    F S K A A R V N V I M C R D A A N S S C L V A N Q P A P A A C L P D S K Q S S V V E H V R G A D G H G G G G V A G Q L P
 
AT3G62420.1     - R R S R M R K Q K Q L G D L I N E V T L L K N D N A K I - - - T E Q V D E A S K K Y I E M - - - - - - - - - - - - - -
Sb031746_Sorbi1    G A E K R V V G G H H L - - - - - - V L D V H G D A A E V L D D A E H I V D G A E A V A E L G G A G A E H G V L L V D A
 
AT3G62420.1     - - - - - - - - - - E S K N N V L R A Q A S E L T D R L R S L N S V L E M V E E I S G Q A L D I P E I P - - - - - - - -
Sb031746_Sorbi1    R V L G R D V G G A R R D A R V L G L Q A R H L - - - L H Q L V Q V L L L P Q P R P P R R L A V R Q P P L L A P V R V R
 
AT3G62420.1     - - - - E S M Q N P W Q M P C P M Q - - - - - - - - - - - - - - - - - - P I - - - - - - - - - - - - - - - - - - - - - -
Sb031746_Sorbi1    R R R R V A V R R P G R P P R P R R R Q R R R R H Q A Y L Q K D P L P L P L L Q L L L F I I R E S K E G R R G W E K G E
 
AT3G62420.1     - R A S A D M F D C - - - - -
Sb031746_Sorbi1    S R T G E G M A D P G E G K L
 
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