fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002700 not found in 149aa AT3G62420.1 not_1st 0.463667820 II
Gm026457 not found in 152aa AT3G62420.1 not_1st 0.432525951 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G62420.1     MGSLQMQTSPESDN---DPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTL
gm002700_Glyma0 MASIQRPASSGSSE-GGDP----VMYERKRKRMESNRESARRSRMKKQKQLEDLTDEVSR
gm026457_Glyma1 MASIPRPASSGSSEGGGDP---AAMDERKRKRMESNRESARRSRMKKQKLLEDLSDVASR
                *.*:   :*. *.:   **    .  ******* ***********:*** * ** : .: 

AT3G62420.1     LKNDNAKITEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEI--SGQAL
gm002700_Glyma0 LEGENARLAPSIKVKEEAYVEMEAANDILRAQTMELADRLRFLNSIIEIADEV--GGESF
gm026457_Glyma1 LQGENVRLAQSIKAKEEAYVEIEAANDILRAQTMELADRLRFLNSILEIADEVGGGGESF
                *:.:*.::: .:.  .: *:*:*: *::****: **:**** ***::*:.:*:  .*:::

AT3G62420.1     DIPEIPESMQNPWQMPCPMQPIRAS-ADMFDC-------
gm002700_Glyma0 EIPQIPDPLFMPWQIPHPMM---ATPPDMFFHGNEGLFA
gm026457_Glyma1 EIPQIPDPLFMPWQIPHPMM---AS-PDMLLHGNQGLFA
                :**:**:.:  ***:* **    *: .**:
BoxShade v3.31 C (beta, 970507) Output
AT3G62420.1     M G S L Q M Q T S P E S D N - - - D P R Y A T V T D E R K R K R M I S N R E S A R R S R M R K Q K Q L G D L I N E V T L
gm002700_Glyma0    M A S I Q R P A S S G S S E - G G D P - - - - V M Y E R K R K R M E S N R E S A R R S R M K K Q K Q L E D L T D E V S R
gm026457_Glyma1    M A S I P R P A S S G S S E G G G D P - - - A A M D E R K R K R M E S N R E S A R R S R M K K Q K L L E D L S D V A S R
 
AT3G62420.1     L K N D N A K I T E Q V D E A S K K Y I E M E S K N N V L R A Q A S E L T D R L R S L N S V L E M V E E I - - S G Q A L
gm002700_Glyma0    L E G E N A R L A P S I K V K E E A Y V E M E A A N D I L R A Q T M E L A D R L R F L N S I I E I A D E V - - G G E S F
gm026457_Glyma1    L Q G E N V R L A Q S I K A K E E A Y V E I E A A N D I L R A Q T M E L A D R L R F L N S I L E I A D E V G G G G E S F
 
AT3G62420.1     D I P E I P E S M Q N P W Q M P C P M Q P I R A S - A D M F D C - - - - - - -
gm002700_Glyma0    E I P Q I P D P L F M P W Q I P H P M M - - - A T P P D M F F H G N E G L F A
gm026457_Glyma1    E I P Q I P D P L F M P W Q I P H P M M - - - A S - P D M L L H G N Q G L F A
 
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