fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052882 not found in 150aa AT3G62420.1 1st_1st 0.515570934 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G62420.1     -MGSLQMQTS------PESDNDPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLIN
gm052882_Glyma1 MASSIQQQRSTATSSGSEGGGDPQ---MIDERKRKRMLSNRESARRSRMRKQKQLEDLTD
                  .*:* * *      .*...**:   : ********:***************** ** :

AT3G62420.1     EVTLLKNDNAKITEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQ
gm052882_Glyma1 EVSRLQGANKKLAENIKAKEEACVETEAANSILRAQTMELADRLRFLNSILEIAEEVEGL
                **: *:. * *::*::.  .:  :* *: *.:****: **:**** ***:**:.**:.* 

AT3G62420.1     ALDIPEIPESMQNPWQMPCPMQPIRASADMFDC
gm052882_Glyma1 SVEIPEIPDPLLKPWQIPHPIQPIMATANMFLR
                :::*****:.: :***:* *:*** *:*:**
BoxShade v3.31 C (beta, 970507) Output
AT3G62420.1     - M G S L Q M Q T S - - - - - - P E S D N D P R Y A T V T D E R K R K R M I S N R E S A R R S R M R K Q K Q L G D L I N
gm052882_Glyma1    M A S S I Q Q Q R S T A T S S G S E G G G D P Q - - - M I D E R K R K R M L S N R E S A R R S R M R K Q K Q L E D L T D
 
AT3G62420.1     E V T L L K N D N A K I T E Q V D E A S K K Y I E M E S K N N V L R A Q A S E L T D R L R S L N S V L E M V E E I S G Q
gm052882_Glyma1    E V S R L Q G A N K K L A E N I K A K E E A C V E T E A A N S I L R A Q T M E L A D R L R F L N S I L E I A E E V E G L
 
AT3G62420.1     A L D I P E I P E S M Q N P W Q M P C P M Q P I R A S A D M F D C
gm052882_Glyma1    S V E I P E I P D P L L K P W Q I P H P I Q P I M A T A N M F L R
 
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