fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G62420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052882 not found in 150aa AT3G62420.1 1st_1st 0.515570934 Ia
Gm002700 not found in 149aa AT3G62420.1 not_1st 0.463667820 II
Gm026457 not found in 152aa AT3G62420.1 not_1st 0.432525951 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G62420.1     -MGSLQMQTSP------ESDNDPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLIN
gm002700_Glyma0 -MASIQR---PASSGSSE-GGDP----VMYERKRKRMESNRESARRSRMKKQKQLEDLTD
gm052882_Glyma1 MASSIQQQRSTATSSGSEGGGDPQ---MIDERKRKRMLSNRESARRSRMRKQKQLEDLTD
gm026457_Glyma1 -MASIPR---PASSGSSEGGGDPA---AMDERKRKRMESNRESARRSRMKKQKLLEDLSD
                  .*:     .      * ..**       ******* ***********:*** * ** :

AT3G62420.1     EVTLLKNDNAKITEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEI--S
gm002700_Glyma0 EVSRLEGENARLAPSIKVKEEAYVEMEAANDILRAQTMELADRLRFLNSIIEIADEV--G
gm052882_Glyma1 EVSRLQGANKKLAENIKAKEEACVETEAANSILRAQTMELADRLRFLNSILEIAEEV--E
gm026457_Glyma1 VASRLQGENVRLAQSIKAKEEAYVEIEAANDILRAQTMELADRLRFLNSILEIADEVGGG
                 .: *:. * ::: .:.  .:  :* *: *.:****: **:**** ***::*:.:*:   

AT3G62420.1     GQALDIPEIPESMQNPWQMPCPMQPIRAS-ADMFDC-------
gm002700_Glyma0 GESFEIPQIPDPLFMPWQIPH---PMMATPPDMFFHGNEGLFA
gm052882_Glyma1 GLSVEIPEIPDPLLKPWQIPHPIQPIMAT-ANMFLR-------
gm026457_Glyma1 GESFEIPQIPDPLFMPWQIPH---PMMAS-PDMLLHGNQGLFA
                * :.:**:**:.:  ***:*    *: *: .:*:
BoxShade v3.31 C (beta, 970507) Output
AT3G62420.1     - M G S L Q M Q T S P - - - - - - E S D N D P R Y A T V T D E R K R K R M I S N R E S A R R S R M R K Q K Q L G D L I N
gm002700_Glyma0    - M A S I Q R - - - P A S S G S S E - G G D P - - - - V M Y E R K R K R M E S N R E S A R R S R M K K Q K Q L E D L T D
gm052882_Glyma1    M A S S I Q Q Q R S T A T S S G S E G G G D P Q - - - M I D E R K R K R M L S N R E S A R R S R M R K Q K Q L E D L T D
gm026457_Glyma1    - M A S I P R - - - P A S S G S S E G G G D P A - - - A M D E R K R K R M E S N R E S A R R S R M K K Q K L L E D L S D
 
AT3G62420.1     E V T L L K N D N A K I T E Q V D E A S K K Y I E M E S K N N V L R A Q A S E L T D R L R S L N S V L E M V E E I - - S
gm002700_Glyma0    E V S R L E G E N A R L A P S I K V K E E A Y V E M E A A N D I L R A Q T M E L A D R L R F L N S I I E I A D E V - - G
gm052882_Glyma1    E V S R L Q G A N K K L A E N I K A K E E A C V E T E A A N S I L R A Q T M E L A D R L R F L N S I L E I A E E V - - E
gm026457_Glyma1    V A S R L Q G E N V R L A Q S I K A K E E A Y V E I E A A N D I L R A Q T M E L A D R L R F L N S I L E I A D E V G G G
 
AT3G62420.1     G Q A L D I P E I P E S M Q N P W Q M P C P M Q P I R A S - A D M F D C - - - - - - -
gm002700_Glyma0    G E S F E I P Q I P D P L F M P W Q I P H - - - P M M A T P P D M F F H G N E G L F A
gm052882_Glyma1    G L S V E I P E I P D P L L K P W Q I P H P I Q P I M A T - A N M F L R - - - - - - -
gm026457_Glyma1    G E S F E I P Q I P D P L F M P W Q I P H - - - P M M A S - P D M L L H G N Q G L F A
 
0