fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031046 not found in 458aa AT4G00050.1 not_1st 0.414976599 II
Pt040346 not found in 484aa AT4G00050.1 not_1st 0.447737909 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00050.1     MS-QCVPNCHIDDTPAAA-TTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPR
gm031046_Glyma1 MS-QCVPSWDVEDNPPPS-RVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPR
pt040346_POPTR_ MSHQCVPSWELDDNPTTAPKVSLRSHSNSGAPYMPMLNYEVAELTWENGQLAMHGLGQPR
                ** ****. .::*.*..:  .::**   : *. :*:*:*************.:**** **

AT4G00050.1     V------TASSTKYS---TGAGGTLESIVDQATRLPN---PKPTDEL------------V
gm031046_Glyma1 VPVKP-PTAATNKYTWEKPRGSGTLESIVNQATSFSHQEKPRPLNGDSGGGGGVYGNFMV
pt040346_POPTR_ VPAKPIASTSPSKYTWDKPRASGTLESIVNLATCIPQ------CNKQTFDNSGSDHDF-V
                *      :::..**:   . ..*******: ** :.:       :              *

AT4G00050.1     PWF-HHRSSRAA------MAMDALVPCSNLVHEQQ------SKPGGVGS-------TRVG
gm031046_Glyma1 PWFDPHAAATTTTTTTNTMTMDALVPCSNREQGKK--KGMESGP---GT-CMVGCSTRVG
pt040346_POPTR_ PWFNHHRASASA-----TMTMDALVPCSKRSDQERTTRVIDSSPAGLGTDCVVGCSTRVG
                ***  * :: ::      *:********:  . ::      * *   *:       ****

AT4G00050.1     SCSDGRTMGGG------KRARVA----P-EWSG-------------GGSQRLTMDTYD--
gm031046_Glyma1 SCCGGKGAKGH------------------EASGRDQSVSGSATFG-RDSKHVTLDTCDRE
pt040346_POPTR_ SCSAPTATQNEVGLLTRKREKVARVPVPAEWS-RDQSVNRGATFSKKDSQQVTVDSCERE
                **.      .                   * *               .*:::*:*: :  

AT4G00050.1     --VGFTS-TSMGSHDN------------TIDDHDSVCHSRPQMED---EEEKKAGGKSSV
gm031046_Glyma1 FGVAFTS-TSINSLENTSYA-KHCTKTTTIEEHDSVSHSKPMGEDGDEEKKKRANGKSSV
pt040346_POPTR_ LGVGFTSTTSFGSQENTSSGTKPCTKTNTADENDSVCHSRPQREAGDEDDKKKGNGKSSV
                  *.*** **:.* :*            * :::***.**:*  *    :.:*:..*****

AT4G00050.1     STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVS
gm031046_Glyma1 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ
pt040346_POPTR_ SNRRSRAAAVHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ
                *.:******:*************************************************.

AT4G00050.1     MMSRMNMPSMMLPMAMQQQQQLQMSLMSNPM-----GLGMGMGMPGLGL--LDLNSM-NR
gm031046_Glyma1 MMNRINMSSMMLPLTM--QQQLQMSMMS-PMGMGL-GMGMGMGM-GMGM---DMNSM-NR
pt040346_POPTR_ MVSRMNMQPMMLPMAL--QQQLQMSMMA-PISMGMAGMGMGMGM-GMGMGVVDMNTLAAR
                *:.*:** .****:::  *******:*: *:     *:****** *:*:   *:*::  *

AT4G00050.1     AAASAPNIHANMMPNPFLPMNCPSWD-----ASSNDSRF--QSP---LIPDPMSAFLACS
gm031046_Glyma1 --ANIPGIPPVLHPSAFMPM-AASWDAAVAAAAGGGDRL--QGTPASVMPDPLSTIFGCQ
pt040346_POPTR_ --SNITGVSPVLHPTAFMPM--TTWD-----GSNSHERLPTAAPSATVMPDPLSAFLACQ
                  :. ..: . : *..*:**  .:**     .:.. .*:   ..   ::***:*:::.*.

AT4G00050.1     TQP-TTMEAYSRMATLYQQMQQQLPPPSNPK-
gm031046_Glyma1 SQLYISMEEYSKLIRI--QLYLAF--------
pt040346_POPTR_ SQP-MTMDAYSRMASMYQQLHQQSP-ASNSKS
                :*   :*: **::  :  *:
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S - Q C V P N C H I D D T P A A A - T T T V R S - - - T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R
gm031046_Glyma1    M S - Q C V P S W D V E D N P P P S - R V S L R S N S N S T A P D V P M L D Y E V A E L T W E N G Q L S M H G L G L P R
pt040346_POPTR_    M S H Q C V P S W E L D D N P T T A P K V S L R S H S N S G A P Y M P M L N Y E V A E L T W E N G Q L A M H G L G Q P R
 
AT4G00050.1     V - - - - - - T A S S T K Y S - - - T G A G G T L E S I V D Q A T R L P N - - - P K P T D E L - - - - - - - - - - - - V
gm031046_Glyma1    V P V K P - P T A A T N K Y T W E K P R G S G T L E S I V N Q A T S F S H Q E K P R P L N G D S G G G G G V Y G N F M V
pt040346_POPTR_    V P A K P I A S T S P S K Y T W D K P R A S G T L E S I V N L A T C I P Q - - - - - - C N K Q T F D N S G S D H D F - V
 
AT4G00050.1     P W F - H H R S S R A A - - - - - - M A M D A L V P C S N L V H E Q Q - - - - - - S K P G G V G S - - - - - - - T R V G
gm031046_Glyma1    P W F D P H A A A T T T T T T T N T M T M D A L V P C S N R E Q G K K - - K G M E S G P - - - G T - C M V G C S T R V G
pt040346_POPTR_    P W F N H H R A S A S A - - - - - T M T M D A L V P C S K R S D Q E R T T R V I D S S P A G L G T D C V V G C S T R V G
 
AT4G00050.1     S C S D G R T M G G G - - - - - - K R A R V A - - - - P - E W S G - - - - - - - - - - - - - G G S Q R L T M D T Y D - -
gm031046_Glyma1    S C C G G K G A K G H - - - - - - - - - - - - - - - - - - E A S G R D Q S V S G S A T F G - R D S K H V T L D T C D R E
pt040346_POPTR_    S C S A P T A T Q N E V G L L T R K R E K V A R V P V P A E W S - R D Q S V N R G A T F S K K D S Q Q V T V D S C E R E
 
AT4G00050.1     - - V G F T S - T S M G S H D N - - - - - - - - - - - - T I D D H D S V C H S R P Q M E D - - - E E E K K A G G K S S V
gm031046_Glyma1    F G V A F T S - T S I N S L E N T S Y A - K H C T K T T T I E E H D S V S H S K P M G E D G D E E K K K R A N G K S S V
pt040346_POPTR_    L G V G F T S T T S F G S Q E N T S S G T K P C T K T N T A D E N D S V C H S R P Q R E A G D E D D K K K G N G K S S V
 
AT4G00050.1     S T K R S R A A A I H N Q S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V S
gm031046_Glyma1    S T K R S R A A A I H N Q S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q
pt040346_POPTR_    S N R R S R A A A V H N Q S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q
 
AT4G00050.1     M M S R M N M P S M M L P M A M Q Q Q Q Q L Q M S L M S N P M - - - - - G L G M G M G M P G L G L - - L D L N S M - N R
gm031046_Glyma1    M M N R I N M S S M M L P L T M - - Q Q Q L Q M S M M S - P M G M G L - G M G M G M G M - G M G M - - - D M N S M - N R
pt040346_POPTR_    M V S R M N M Q P M M L P M A L - - Q Q Q L Q M S M M A - P I S M G M A G M G M G M G M - G M G M G V V D M N T L A A R
 
AT4G00050.1     A A A S A P N I H A N M M P N P F L P M N C P S W D - - - - - A S S N D S R F - - Q S P - - - L I P D P M S A F L A C S
gm031046_Glyma1    - - A N I P G I P P V L H P S A F M P M - A A S W D A A V A A A A G G G D R L - - Q G T P A S V M P D P L S T I F G C Q
pt040346_POPTR_    - - S N I T G V S P V L H P T A F M P M - - T T W D - - - - - G S N S H E R L P T A A P S A T V M P D P L S A F L A C Q
 
AT4G00050.1     T Q P - T T M E A Y S R M A T L Y Q Q M Q Q Q L P P P S N P K -
gm031046_Glyma1    S Q L Y I S M E E Y S K L I R I - - Q L Y L A F - - - - - - - -
pt040346_POPTR_    S Q P - M T M D A Y S R M A S M Y Q Q L H Q Q S P - A S N S K S
 
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