fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000906 not found in 458aa AT4G00050.1 1st_1st 0.452418096 Ia
Pt016460 not found in 471aa AT4G00050.1 1st_1st 0.494539781 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00050.1     MS-QCVPNCHIDDTPAAA-TTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPR
gm000906_Glyma0 MS-QCVPSWDVEDNPPPS-RVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPR
pt016460_POPTR_ MSHQCVPSWEVDDNRTTAPKLSLRFHSNSSAPDMPMLDYEVAELTWENGQIAMHGLGPPR
                ** ****. .::*. ..:   ::*    ::*.*:*:**************:.:**** **

AT4G00050.1     V-----TASS-TKYS---TGAGGTLESIVDQATRLPN-PKPT------------DELVPW
gm000906_Glyma0 VPVKPPTAVT-NKYTWEKPRASGTLESIVNQVTSFPHRGKPTPLNGGGGGGVYGNFRVPW
pt016460_POPTR_ VPAKPIASTSPSKYTWDKPRASGTLESIVNQATCVPQCNKATFDNSTGS----DHDLIPW
                *     :: : .**:   . *.*******:*.* .*:  *.*            .  :**

AT4G00050.1     F--HHRSSRAA-MAMDALVPCSNL--------VHEQQSKPGGVG------STRVGSCSDG
gm000906_Glyma0 FDPHATATTTNTVTMDALVPCSNREQSKQG-----MESVPG--GTCMVGCSTRVGSCCGG
pt016460_POPTR_ FN-HHKASASATMTMDALVPCSNR--SDQGRTTHVIDSGPAGLGTCVVGCSTRVGSCSAP
                *  *  :: :  ::*********             :* *.  *      *******.  

AT4G00050.1     RTMGG------GKRARVA-----PEWS-----------G-GGSQRLTMDT----YDVGFT
gm000906_Glyma0 KGAKGHEA--TG---------------RDQSVSGSATFG-RDSKHVTLDTCDREFGVGFT
pt016460_POPTR_ AATQDEDGLLTGKRARVARVPVPPEWSRDQSVNHSATFGKKDSQQMTVDSCEREFGVGFT
                    .      *                          *  .*:::*:*:    :.****

AT4G00050.1     STSMGSHDN------------TIDDHDSVCHSRPQMEDEEE---KKAGGKSSVSTKRSRA
gm000906_Glyma0 STSINSLENTSSAKH-CTKTTTVDDHDSVSHSKPVGEDQDEGKKKRANGKSSVSTKRSRA
pt016460_POPTR_ STSFGSQENTSSGTNPCTKTLTADENDSVCHSRPQREAGKEDDKKKGNGKSSVSTKRSRA
                ***:.* :*            * *::***.**:*  *  .*   *:..************

AT4G00050.1     AAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNM
gm000906_Glyma0 AAIHNQSERKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMINRINM
pt016460_POPTR_ AAIHNQSERKRRDKINQRMKTLQKLVPSSSKTDKASMLDEVIEYLKQLQAQVQMMSRMNM
                ***************************.***:*******************:.*:.*:**

AT4G00050.1     PSMMLPMAMQQQQQLQMSLMSNPMGLGM--GMGMPGLGL-LDLNSM-NRAAASAPNIHAN
gm000906_Glyma0 SSMMLPLTM--QQQLQMSMMS-PMGMGLGMGMGM-GMGMGMDMNSM-NR--AHIPGIPPV
pt016460_POPTR_ QPMMLPLAL--QQQLQMSMMA-PMSIGMA-GMGM-GMGV-MDMNTIAAR--SNMTGIPPA
                 .****:::  *******:*: **.:*:  **** *:*: :*:*::  *  :  ..* . 

AT4G00050.1     MMPNPFLPMNCPSWDASS---NDSRFQSPLI---PDPMSAFLACSTQPTTMEAYSRMATL
gm000906_Glyma0 LHPSAFMPM-AASWDAAAAAGGGDRLQGTPANVMPDPLSTFFGCQSQPMTIDAYSRLAAM
pt016460_POPTR_ LHPTAFIPL--TTWDGSS---GHDRLQTTAA----DPMSAFLACQTQPMTMDAYSRMAAM
                : *..*:*:  .:**.::   . .*:* .      **:*:*:.*.:** *::****:*::

AT4G00050.1     YQQMQQQLPPPSNPK-
gm000906_Glyma0 YQQLHQP-PPASGSKN
pt016460_POPTR_ YQQLHQQ-PPASNSKG
                ***::*  **.*..*
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S - Q C V P N C H I D D T P A A A - T T T V R S - - - T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R
gm000906_Glyma0    M S - Q C V P S W D V E D N P P P S - R V S L R S N S N S T A P D V P M L D Y E V A E L T W E N G Q L S M H G L G L P R
pt016460_POPTR_    M S H Q C V P S W E V D D N R T T A P K L S L R F H S N S S A P D M P M L D Y E V A E L T W E N G Q I A M H G L G P P R
 
AT4G00050.1     V - - - - - T A S S - T K Y S - - - T G A G G T L E S I V D Q A T R L P N - P K P T - - - - - - - - - - - - D E L V P W
gm000906_Glyma0    V P V K P P T A V T - N K Y T W E K P R A S G T L E S I V N Q V T S F P H R G K P T P L N G G G G G G V Y G N F R V P W
pt016460_POPTR_    V P A K P I A S T S P S K Y T W D K P R A S G T L E S I V N Q A T C V P Q C N K A T F D N S T G S - - - - D H D L I P W
 
AT4G00050.1     F - - H H R S S R A A - M A M D A L V P C S N L - - - - - - - - V H E Q Q S K P G G V G - - - - - - S T R V G S C S D G
gm000906_Glyma0    F D P H A T A T T T N T V T M D A L V P C S N R E Q S K Q G - - - - - M E S V P G - - G T C M V G C S T R V G S C C G G
pt016460_POPTR_    F N - H H K A S A S A T M T M D A L V P C S N R - - S D Q G R T T H V I D S G P A G L G T C V V G C S T R V G S C S A P
 
AT4G00050.1     R T M G G - - - - - - G K R A R V A - - - - - P E W S - - - - - - - - - - - G - G G S Q R L T M D T - - - - Y D V G F T
gm000906_Glyma0    K G A K G H E A - - T G - - - - - - - - - - - - - - - R D Q S V S G S A T F G - R D S K H V T L D T C D R E F G V G F T
pt016460_POPTR_    A A T Q D E D G L L T G K R A R V A R V P V P P E W S R D Q S V N H S A T F G K K D S Q Q M T V D S C E R E F G V G F T
 
AT4G00050.1     S T S M G S H D N - - - - - - - - - - - - T I D D H D S V C H S R P Q M E D E E E - - - K K A G G K S S V S T K R S R A
gm000906_Glyma0    S T S I N S L E N T S S A K H - C T K T T T V D D H D S V S H S K P V G E D Q D E G K K K R A N G K S S V S T K R S R A
pt016460_POPTR_    S T S F G S Q E N T S S G T N P C T K T L T A D E N D S V C H S R P Q R E A G K E D D K K K G N G K S S V S T K R S R A
 
AT4G00050.1     A A I H N Q S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V S M M S R M N M
gm000906_Glyma0    A A I H N Q S E R K R R D K I N Q R M K T L Q K L V P N S S K S D K A S M L D E V I E Y L K Q L Q A Q L Q M I N R I N M
pt016460_POPTR_    A A I H N Q S E R K R R D K I N Q R M K T L Q K L V P S S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q M M S R M N M
 
AT4G00050.1     P S M M L P M A M Q Q Q Q Q L Q M S L M S N P M G L G M - - G M G M P G L G L - L D L N S M - N R A A A S A P N I H A N
gm000906_Glyma0    S S M M L P L T M - - Q Q Q L Q M S M M S - P M G M G L G M G M G M - G M G M G M D M N S M - N R - - A H I P G I P P V
pt016460_POPTR_    Q P M M L P L A L - - Q Q Q L Q M S M M A - P M S I G M A - G M G M - G M G V - M D M N T I A A R - - S N M T G I P P A
 
AT4G00050.1     M M P N P F L P M N C P S W D A S S - - - N D S R F Q S P L I - - - P D P M S A F L A C S T Q P T T M E A Y S R M A T L
gm000906_Glyma0    L H P S A F M P M - A A S W D A A A A A G G G D R L Q G T P A N V M P D P L S T F F G C Q S Q P M T I D A Y S R L A A M
pt016460_POPTR_    L H P T A F I P L - - T T W D G S S - - - G H D R L Q T T A A - - - - D P M S A F L A C Q T Q P M T M D A Y S R M A A M
 
AT4G00050.1     Y Q Q M Q Q Q L P P P S N P K -
gm000906_Glyma0    Y Q Q L H Q P - P P A S G S K N
pt016460_POPTR_    Y Q Q L H Q Q - P P A S N S K G
 
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