fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040346 not found in 484aa AT4G00050.1 not_1st 0.447737909 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00050.1     MS-QCVPNCHIDDTPAAA-TTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPR
pt040346_POPTR_ MSHQCVPSWELDDNPTTAPKVSLRSHSNSGAPYMPMLNYEVAELTWENGQLAMHGLGQPR
                ** ****. .:**.*::* ..::**   : *. :*:*:*************.:**** **

AT4G00050.1     VTA------SSTKYS---TGAGGTLESIVDQATRLP--------NPKPTDELVPWF-HHR
pt040346_POPTR_ VPAKPIASTSPSKYTWDKPRASGTLESIVNLATCIPQCNKQTFDNSGSDHDFVPWFNHHR
                *.*      *.:**:   . *.*******: ** :*        *. . .::**** ***

AT4G00050.1     SSRAA-MAMDALVPCSNLVHEQQ------SKPGGVG-------STRVGSCSDGRTMGGG-
pt040346_POPTR_ ASASATMTMDALVPCSKRSDQERTTRVIDSSPAGLGTDCVVGCSTRVGSCSAPTATQNEV
                :* :* *:********:  .:::      *.*.*:*       ********   :  .  

AT4G00050.1     -----KRARVA-----PEW------------SGGGSQRLTMDTYD----VGFTS-TSMGS
pt040346_POPTR_ GLLTRKREKVARVPVPAEWSRDQSVNRGATFSKKDSQQVTVDSCERELGVGFTSTTSFGS
                     ** :**     .**            *  .**::*:*: :    ***** **:**

AT4G00050.1     HD------------NTIDDHDSVCHSRPQME--DEEEKKAG-GKSSVSTKRSRAAAIHNQ
pt040346_POPTR_ QENTSSGTKPCTKTNTADENDSVCHSRPQREAGDEDDKKKGNGKSSVSNRRSRAAAVHNQ
                ::            ** *::********* *  **::** * ******.:******:***

AT4G00050.1     SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLP
pt040346_POPTR_ SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMVSRMNMQPMMLP
                **********************************************.*:***** .****

AT4G00050.1     MAMQQQQQLQMSLMSNP-------MGLGMGMGMPGLGLLDLNSMNRAAAS-----APNIH
pt040346_POPTR_ MAL--QQQLQMSMMA-PISMGMAGMGMGMGMGM-GMGVVDMNTL--AARSNITGVSPVLH
                **:  *******:*: *       **:****** *:*::*:*::  ** *     :* :*

AT4G00050.1     ANMMPNPFLPMNCPSWDASSNDSRF-----QSPLIPDPMSAFLACSTQPTTMEAYSRMAT
pt040346_POPTR_ ----PTAFMPMT--TWDGSNSHERLPTAAPSATVMPDPLSAFLACQSQPMTMDAYSRMAS
                    *..*:**.  :**.*....*:     .:.::***:******.:** **:******:

AT4G00050.1     LYQQMQQQLPPPSNPK-
pt040346_POPTR_ MYQQLHQQ-SPASNSKS
                :***::** .*.**.*
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S - Q C V P N C H I D D T P A A A - T T T V R S - - - T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R
pt040346_POPTR_    M S H Q C V P S W E L D D N P T T A P K V S L R S H S N S G A P Y M P M L N Y E V A E L T W E N G Q L A M H G L G Q P R
 
AT4G00050.1     V T A - - - - - - S S T K Y S - - - T G A G G T L E S I V D Q A T R L P - - - - - - - - N P K P T D E L V P W F - H H R
pt040346_POPTR_    V P A K P I A S T S P S K Y T W D K P R A S G T L E S I V N L A T C I P Q C N K Q T F D N S G S D H D F V P W F N H H R
 
AT4G00050.1     S S R A A - M A M D A L V P C S N L V H E Q Q - - - - - - S K P G G V G - - - - - - - S T R V G S C S D G R T M G G G -
pt040346_POPTR_    A S A S A T M T M D A L V P C S K R S D Q E R T T R V I D S S P A G L G T D C V V G C S T R V G S C S A P T A T Q N E V
 
AT4G00050.1     - - - - - K R A R V A - - - - - P E W - - - - - - - - - - - - S G G G S Q R L T M D T Y D - - - - V G F T S - T S M G S
pt040346_POPTR_    G L L T R K R E K V A R V P V P A E W S R D Q S V N R G A T F S K K D S Q Q V T V D S C E R E L G V G F T S T T S F G S
 
AT4G00050.1     H D - - - - - - - - - - - - N T I D D H D S V C H S R P Q M E - - D E E E K K A G - G K S S V S T K R S R A A A I H N Q
pt040346_POPTR_    Q E N T S S G T K P C T K T N T A D E N D S V C H S R P Q R E A G D E D D K K K G N G K S S V S N R R S R A A A V H N Q
 
AT4G00050.1     S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V S M M S R M N M P S M M L P
pt040346_POPTR_    S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q M V S R M N M Q P M M L P
 
AT4G00050.1     M A M Q Q Q Q Q L Q M S L M S N P - - - - - - - M G L G M G M G M P G L G L L D L N S M N R A A A S - - - - - A P N I H
pt040346_POPTR_    M A L - - Q Q Q L Q M S M M A - P I S M G M A G M G M G M G M G M - G M G V V D M N T L - - A A R S N I T G V S P V L H
 
AT4G00050.1     A N M M P N P F L P M N C P S W D A S S N D S R F - - - - - Q S P L I P D P M S A F L A C S T Q P T T M E A Y S R M A T
pt040346_POPTR_    - - - - P T A F M P M T - - T W D G S N S H E R L P T A A P S A T V M P D P L S A F L A C Q S Q P M T M D A Y S R M A S
 
AT4G00050.1     L Y Q Q M Q Q Q L P P P S N P K -
pt040346_POPTR_    M Y Q Q L H Q Q - S P A S N S K S
 
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