fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016460 not found in 471aa AT4G00050.1 1st_1st 0.494539781 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00050.1     MS-QCVPNCHIDDT-PAAATTTVR---STTAADIPILDYEVAELTWENGQLGLHGLGPPR
pt016460_POPTR_ MSHQCVPSWEVDDNRTTAPKLSLRFHSNSSAPDMPMLDYEVAELTWENGQIAMHGLGPPR
                ** ****. .:**. .:*.. ::*   .::*.*:*:**************:.:*******

AT4G00050.1     VTA------SSTKYS---TGAGGTLESIVDQATRLP--------NPKPTD-ELVPWF-HH
pt016460_POPTR_ VPAKPIASTSPSKYTWDKPRASGTLESIVNQATCVPQCNKATFDNSTGSDHDLIPWFNHH
                *.*      *.:**:   . *.*******:*** :*        *.. :* :*:*** **

AT4G00050.1     RSSRAA-MAMDALVPCSN------LVHEQQSKPGGVG------STRVGSCS------DGR
pt016460_POPTR_ KASASATMTMDALVPCSNRSDQGRTTHVIDSGPAGLGTCVVGCSTRVGSCSAPAATQDED
                ::* :* *:*********       .*  :* *.*:*      ********      *  

AT4G00050.1     TMGGGKRARVA-----PEWS------------GGGSQRLTMDT----YDVGFTSTSMGSH
pt016460_POPTR_ GLLTGKRARVARVPVPPEWSRDQSVNHSATFGKKDSQQMTVDSCEREFGVGFTSTSFGSQ
                 :  *******     ****              .**::*:*:    :.*******:**:

AT4G00050.1     DN------------TIDDHDSVCHSRPQME---DEEEKKAGGKSSVSTKRSRAAAIHNQS
pt016460_POPTR_ ENTSSGTNPCTKTLTADENDSVCHSRPQREAGKEDDKKKGNGKSSVSTKRSRAAAIHNQS
                :*            * *::********* *   ::::**..*******************

AT4G00050.1     ERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLPM
pt016460_POPTR_ ERKRRDKINQRMKTLQKLVPSSSKTDKASMLDEVIEYLKQLQAQVQMMSRMNMQPMMLPL
                ********************.************************.******* .****:

AT4G00050.1     AMQQQQQLQMSLMSNPMGLGM-GMGMPGLGLLDLNSMNRAAAS-----APNIHANMMPNP
pt016460_POPTR_ AL--QQQLQMSMMA-PMSIGMAGMGM-GMGVMDMNTI--AARSNMTGIPPALH----PTA
                *:  *******:*: **.:** **** *:*::*:*::  ** *     .* :*    *..

AT4G00050.1     FLPMNCPSWDASSNDSRFQSPLIPDPMSAFLACSTQPTTMEAYSRMATLYQQMQQQLPPP
pt016460_POPTR_ FIPLT--TWDGSSGHDRLQTT-AADPMSAFLACQTQPMTMDAYSRMAAMYQQLHQQ-PPA
                *:*:.  :**.**...*:*:.  .*********.*** **:******::***::** **.

AT4G00050.1     SNPK-
pt016460_POPTR_ SNSKG
                **.*
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S - Q C V P N C H I D D T - P A A A T T T V R - - - S T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R
pt016460_POPTR_    M S H Q C V P S W E V D D N R T T A P K L S L R F H S N S S A P D M P M L D Y E V A E L T W E N G Q I A M H G L G P P R
 
AT4G00050.1     V T A - - - - - - S S T K Y S - - - T G A G G T L E S I V D Q A T R L P - - - - - - - - N P K P T D - E L V P W F - H H
pt016460_POPTR_    V P A K P I A S T S P S K Y T W D K P R A S G T L E S I V N Q A T C V P Q C N K A T F D N S T G S D H D L I P W F N H H
 
AT4G00050.1     R S S R A A - M A M D A L V P C S N - - - - - - L V H E Q Q S K P G G V G - - - - - - S T R V G S C S - - - - - - D G R
pt016460_POPTR_    K A S A S A T M T M D A L V P C S N R S D Q G R T T H V I D S G P A G L G T C V V G C S T R V G S C S A P A A T Q D E D
 
AT4G00050.1     T M G G G K R A R V A - - - - - P E W S - - - - - - - - - - - - G G G S Q R L T M D T - - - - Y D V G F T S T S M G S H
pt016460_POPTR_    G L L T G K R A R V A R V P V P P E W S R D Q S V N H S A T F G K K D S Q Q M T V D S C E R E F G V G F T S T S F G S Q
 
AT4G00050.1     D N - - - - - - - - - - - - T I D D H D S V C H S R P Q M E - - - D E E E K K A G G K S S V S T K R S R A A A I H N Q S
pt016460_POPTR_    E N T S S G T N P C T K T L T A D E N D S V C H S R P Q R E A G K E D D K K K G N G K S S V S T K R S R A A A I H N Q S
 
AT4G00050.1     E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V S M M S R M N M P S M M L P M
pt016460_POPTR_    E R K R R D K I N Q R M K T L Q K L V P S S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q M M S R M N M Q P M M L P L
 
AT4G00050.1     A M Q Q Q Q Q L Q M S L M S N P M G L G M - G M G M P G L G L L D L N S M N R A A A S - - - - - A P N I H A N M M P N P
pt016460_POPTR_    A L - - Q Q Q L Q M S M M A - P M S I G M A G M G M - G M G V M D M N T I - - A A R S N M T G I P P A L H - - - - P T A
 
AT4G00050.1     F L P M N C P S W D A S S N D S R F Q S P L I P D P M S A F L A C S T Q P T T M E A Y S R M A T L Y Q Q M Q Q Q L P P P
pt016460_POPTR_    F I P L T - - T W D G S S G H D R L Q T T - A A D P M S A F L A C Q T Q P M T M D A Y S R M A A M Y Q Q L H Q Q - P P A
 
AT4G00050.1     S N P K -
pt016460_POPTR_    S N S K G
 
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