fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016460 not found in 471aa AT4G00050.1 1st_1st 0.494539781 Ia
Pt040346 not found in 484aa AT4G00050.1 not_1st 0.447737909 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00050.1     MS-QCVPNCHIDDTPAAA-TTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPR
pt016460_POPTR_ MSHQCVPSWEVDDNRTTAPKLSLRFHSNSSAPDMPMLDYEVAELTWENGQIAMHGLGPPR
pt040346_POPTR_ MSHQCVPSWELDDNPTTAPKVSLRSHSNSGAPYMPMLNYEVAELTWENGQLAMHGLGQPR
                ** ****. .:**. ::* . ::*    : *. :*:*:************:.:**** **

AT4G00050.1     VTA------SSTKYS---TGAGGTLESIVDQATRLP--------NPKPTD-ELVPWF-HH
pt016460_POPTR_ VPAKPIASTSPSKYTWDKPRASGTLESIVNQATCVPQCNKATFDNSTGSDHDLIPWFNHH
pt040346_POPTR_ VPAKPIASTSPSKYTWDKPRASGTLESIVNLATCIPQCNKQTFDNS-GSDHDFVPWFNHH
                *.*      *.:**:   . *.*******: ** :*        *.  :* :::*** **

AT4G00050.1     RSSRAA-MAMDALVPCSNLVHEQQ------SKPGGVGS-------TRVGSCS------DG
pt016460_POPTR_ KASASATMTMDALVPCSNRSDQGRTTHVIDSGPAGLGT-CVVGCSTRVGSCSAPAATQDE
pt040346_POPTR_ RASASATMTMDALVPCSKRSDQERTTRVIDSSPAGLGTDCVVGCSTRVGSCSAPTATQNE
                ::* :* *:********:  .: :      * *.*:*:       *******      : 

AT4G00050.1     RTMGGGKRARVA-----PEWS------------GGGSQRLTMDT----YDVGFTS-TSMG
pt016460_POPTR_ DGLLTGKRARVARVPVPPEWSRDQSVNHSATFGKKDSQQMTVDSCEREFGVGFTS-TSFG
pt040346_POPTR_ VGLLTRKREKVARVPVPAEWSRDQSVNRGATFSKKDSQQVTVDSCERELGVGFTSTTSFG
                  :   ** :**     .***              .**::*:*:     .***** **:*

AT4G00050.1     SHDN------------TIDDHDSVCHSRPQME--DEEEKKAG-GKSSVSTKRSRAAAIHN
pt016460_POPTR_ SQENTSSGTNPCTKTLTADENDSVCHSRPQREAGKEDDKKKGNGKSSVSTKRSRAAAIHN
pt040346_POPTR_ SQENTSSGTKPCTKTNTADENDSVCHSRPQREAGDEDDKKKGNGKSSVSNRRSRAAAVHN
                *::*            * *::********* *  .*::** * ******.:******:**

AT4G00050.1     QSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMML
pt016460_POPTR_ QSERKRRDKINQRMKTLQKLVPSSSKTDKASMLDEVIEYLKQLQAQVQMMSRMNMQPMML
pt040346_POPTR_ QSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMVSRMNMQPMML
                **********************.************************.*:***** .***

AT4G00050.1     PMAMQQQQQLQMSLMSNPMGLGM-------GMGMPGLGLLDLNSMNRAAAS-----APNI
pt016460_POPTR_ PLAL--QQQLQMSMMA-PMSIGMA------GMGM-GMGVMDMNTI--AARSNMTGIPPAL
pt040346_POPTR_ PMAL--QQQLQMSMMA-PISMGMAGMGMGMGMGM-GMGVVDMNTL--AARSNITGVSPVL
                *:*:  *******:*: *:.:**       **** *:*::*:*::  ** *     .* :

AT4G00050.1     HANMMPNPFLPMNCPSWDASSNDSRFQSPL-----IPDPMSAFLACSTQPTTMEAYSRMA
pt016460_POPTR_ H----PTAFIPLT--TWDGSSGHDRLQTTA------ADPMSAFLACQTQPMTMDAYSRMA
pt040346_POPTR_ H----PTAFMPMT--TWDGSNSHERLPTAAPSATVMPDPLSAFLACQSQPMTMDAYSRMA
                *    *..*:*:.  :**.*....*: :.       .**:******.:** **:******

AT4G00050.1     TLYQQMQQQLPPPSNPK-
pt016460_POPTR_ AMYQQLHQQ-PPASNSKG
pt040346_POPTR_ SMYQQLHQQ-SPASNSKS
                ::***::** .*.**.*
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S - Q C V P N C H I D D T P A A A - T T T V R S - - - T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R
pt016460_POPTR_    M S H Q C V P S W E V D D N R T T A P K L S L R F H S N S S A P D M P M L D Y E V A E L T W E N G Q I A M H G L G P P R
pt040346_POPTR_    M S H Q C V P S W E L D D N P T T A P K V S L R S H S N S G A P Y M P M L N Y E V A E L T W E N G Q L A M H G L G Q P R
 
AT4G00050.1     V T A - - - - - - S S T K Y S - - - T G A G G T L E S I V D Q A T R L P - - - - - - - - N P K P T D - E L V P W F - H H
pt016460_POPTR_    V P A K P I A S T S P S K Y T W D K P R A S G T L E S I V N Q A T C V P Q C N K A T F D N S T G S D H D L I P W F N H H
pt040346_POPTR_    V P A K P I A S T S P S K Y T W D K P R A S G T L E S I V N L A T C I P Q C N K Q T F D N S - G S D H D F V P W F N H H
 
AT4G00050.1     R S S R A A - M A M D A L V P C S N L V H E Q Q - - - - - - S K P G G V G S - - - - - - - T R V G S C S - - - - - - D G
pt016460_POPTR_    K A S A S A T M T M D A L V P C S N R S D Q G R T T H V I D S G P A G L G T - C V V G C S T R V G S C S A P A A T Q D E
pt040346_POPTR_    R A S A S A T M T M D A L V P C S K R S D Q E R T T R V I D S S P A G L G T D C V V G C S T R V G S C S A P T A T Q N E
 
AT4G00050.1     R T M G G G K R A R V A - - - - - P E W S - - - - - - - - - - - - G G G S Q R L T M D T - - - - Y D V G F T S - T S M G
pt016460_POPTR_    D G L L T G K R A R V A R V P V P P E W S R D Q S V N H S A T F G K K D S Q Q M T V D S C E R E F G V G F T S - T S F G
pt040346_POPTR_    V G L L T R K R E K V A R V P V P A E W S R D Q S V N R G A T F S K K D S Q Q V T V D S C E R E L G V G F T S T T S F G
 
AT4G00050.1     S H D N - - - - - - - - - - - - T I D D H D S V C H S R P Q M E - - D E E E K K A G - G K S S V S T K R S R A A A I H N
pt016460_POPTR_    S Q E N T S S G T N P C T K T L T A D E N D S V C H S R P Q R E A G K E D D K K K G N G K S S V S T K R S R A A A I H N
pt040346_POPTR_    S Q E N T S S G T K P C T K T N T A D E N D S V C H S R P Q R E A G D E D D K K K G N G K S S V S N R R S R A A A V H N
 
AT4G00050.1     Q S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V S M M S R M N M P S M M L
pt016460_POPTR_    Q S E R K R R D K I N Q R M K T L Q K L V P S S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q M M S R M N M Q P M M L
pt040346_POPTR_    Q S E R K R R D K I N Q R M K T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q M V S R M N M Q P M M L
 
AT4G00050.1     P M A M Q Q Q Q Q L Q M S L M S N P M G L G M - - - - - - - G M G M P G L G L L D L N S M N R A A A S - - - - - A P N I
pt016460_POPTR_    P L A L - - Q Q Q L Q M S M M A - P M S I G M A - - - - - - G M G M - G M G V M D M N T I - - A A R S N M T G I P P A L
pt040346_POPTR_    P M A L - - Q Q Q L Q M S M M A - P I S M G M A G M G M G M G M G M - G M G V V D M N T L - - A A R S N I T G V S P V L
 
AT4G00050.1     H A N M M P N P F L P M N C P S W D A S S N D S R F Q S P L - - - - - I P D P M S A F L A C S T Q P T T M E A Y S R M A
pt016460_POPTR_    H - - - - P T A F I P L T - - T W D G S S G H D R L Q T T A - - - - - - A D P M S A F L A C Q T Q P M T M D A Y S R M A
pt040346_POPTR_    H - - - - P T A F M P M T - - T W D G S N S H E R L P T A A P S A T V M P D P L S A F L A C Q S Q P M T M D A Y S R M A
 
AT4G00050.1     T L Y Q Q M Q Q Q L P P P S N P K -
pt016460_POPTR_    A M Y Q Q L H Q Q - P P A S N S K G
pt040346_POPTR_    S M Y Q Q L H Q Q - S P A S N S K S
 
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