fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031046 not found in 458aa AT4G00050.1 not_1st 0.414976599 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00050.1     MSQCVPNCHIDDTPAAATTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPRV-
gm031046_Glyma1 MSQCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVP
                ******. .::*.*..: .::**   :**.*:*:***************.:**** *** 

AT4G00050.1     ----TASSTKYS---TGAGGTLESIVDQATRLPN---PKPTDE------------LVPWF
gm031046_Glyma1 VKPPTAATNKYTWEKPRGSGTLESIVNQATSFSHQEKPRPLNGDSGGGGGVYGNFMVPWF
                    **::.**:   . ..*******:*** :.:   *:* :             :****

AT4G00050.1     HHRSSRA-------AMAMDALVPCSNLVHEQQSKPG---GVG------STRVGSCSDGRT
gm031046_Glyma1 DPHAAATTTTTTTNTMTMDALVPCSN--REQGKKKGMESGPGTCMVGCSTRVGSCCGGKG
                . ::: :       :*:*********  :** .* *   * *      *******..*: 

AT4G00050.1     MGG----GKRARVAPEWS-GGGSQRLTMDTYD----VGFTSTSMGSHDN-----------
gm031046_Glyma1 AKGHEASGRDQSVSGSATFGRDSKHVTLDTCDREFGVAFTSTSINSLENTSYAKHCTKTT
                  *    *:   *: . : * .*:::*:** *    *.*****:.* :*           

AT4G00050.1     TIDDHDSVCHSRPQMED---EEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKT
gm031046_Glyma1 TIEEHDSVSHSKPMGEDGDEEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKT
                **::****.**:*  **   *::*:*.*********************************

AT4G00050.1     LQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMSLMS
gm031046_Glyma1 LQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRINMSSMMLPLTM--QQQLQMSMMS
                *******************************.**.*:**.*****::*  *******:**

AT4G00050.1     NPMGLGMGMGMPGLGL---LDLNSMNRAAASAPNIHANMMPNPFLPMNCPSWD-----AS
gm031046_Glyma1 -PMGMGLGMGM-GMGMGMGMDMNSMNR--ANIPGIPPVLHPSAFMPM-AASWDAAVAAAA
                 ***:*:**** *:*:   :*:*****  *. *.* . : *..*:** ..***     *:

AT4G00050.1     SNDSRFQ---SPLIPDPMSAFLACSTQP-TTMEAYSRM--ATLYQQMQQQLPPPSNPK
gm031046_Glyma1 GGGDRLQGTPASVMPDPLSTIFGCQSQLYISMEEYSKLIRIQLYLAF-----------
                ....*:*   :.::***:*:::.*.:*   :** **::    **  :
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S Q C V P N C H I D D T P A A A T T T V R S - - - T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R V -
gm031046_Glyma1    M S Q C V P S W D V E D N P P P S R V S L R S N S N S T A P D V P M L D Y E V A E L T W E N G Q L S M H G L G L P R V P
 
AT4G00050.1     - - - - T A S S T K Y S - - - T G A G G T L E S I V D Q A T R L P N - - - P K P T D E - - - - - - - - - - - - L V P W F
gm031046_Glyma1    V K P P T A A T N K Y T W E K P R G S G T L E S I V N Q A T S F S H Q E K P R P L N G D S G G G G G V Y G N F M V P W F
 
AT4G00050.1     H H R S S R A - - - - - - - A M A M D A L V P C S N L V H E Q Q S K P G - - - G V G - - - - - - S T R V G S C S D G R T
gm031046_Glyma1    D P H A A A T T T T T T T N T M T M D A L V P C S N - - R E Q G K K K G M E S G P G T C M V G C S T R V G S C C G G K G
 
AT4G00050.1     M G G - - - - G K R A R V A P E W S - G G G S Q R L T M D T Y D - - - - V G F T S T S M G S H D N - - - - - - - - - - -
gm031046_Glyma1    A K G H E A S G R D Q S V S G S A T F G R D S K H V T L D T C D R E F G V A F T S T S I N S L E N T S Y A K H C T K T T
 
AT4G00050.1     T I D D H D S V C H S R P Q M E D - - - E E E K K A G G K S S V S T K R S R A A A I H N Q S E R K R R D K I N Q R M K T
gm031046_Glyma1    T I E E H D S V S H S K P M G E D G D E E K K K R A N G K S S V S T K R S R A A A I H N Q S E R K R R D K I N Q R M K T
 
AT4G00050.1     L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V S M M S R M N M P S M M L P M A M Q Q Q Q Q L Q M S L M S
gm031046_Glyma1    L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q M M N R I N M S S M M L P L T M - - Q Q Q L Q M S M M S
 
AT4G00050.1     N P M G L G M G M G M P G L G L - - - L D L N S M N R A A A S A P N I H A N M M P N P F L P M N C P S W D - - - - - A S
gm031046_Glyma1    - P M G M G L G M G M - G M G M G M G M D M N S M N R - - A N I P G I P P V L H P S A F M P M - A A S W D A A V A A A A
 
AT4G00050.1     S N D S R F Q - - - S P L I P D P M S A F L A C S T Q P - T T M E A Y S R M - - A T L Y Q Q M Q Q Q L P P P S N P K
gm031046_Glyma1    G G G D R L Q G T P A S V M P D P L S T I F G C Q S Q L Y I S M E E Y S K L I R I Q L Y L A F - - - - - - - - - - -
 
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