fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000906 not found in 458aa AT4G00050.1 1st_1st 0.452418096 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00050.1     MSQCVPNCHIDDTPAAATTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPRV-
gm000906_Glyma0 MSQCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVP
                ******. .::*.*..: .::**   :**.*:*:***************.:**** *** 

AT4G00050.1     ----TASSTKYS---TGAGGTLESIVDQATRLPNP-KPT------------DELVPWFHH
gm000906_Glyma0 VKPPTAVTNKYTWEKPRASGTLESIVNQVTSFPHRGKPTPLNGGGGGGVYGNFRVPWFDP
                    ** :.**:   . *.*******:*.* :*:  ***            :  ****. 

AT4G00050.1     RSSRA---AMAMDALVPCSNLVHEQQ---SKPGG---VG-STRVGSCSDGRTMGG----G
gm000906_Glyma0 HATATTTNTVTMDALVPCSNREQSKQGMESVPGGTCMVGCSTRVGSCCGGKGAKGHEATG
                ::: :   :::*********  :.:*   * ***   ** *******..*:   *    *

AT4G00050.1     KRARVAPEWS-GGGSQRLTMDTYD----VGFTSTSMGSHDN-----------TIDDHDSV
gm000906_Glyma0 RDQSVSGSATFGRDSKHVTLDTCDREFGVGFTSTSINSLENTSSAKHCTKTTTVDDHDSV
                :   *: . : * .*:::*:** *    *******:.* :*           *:******

AT4G00050.1     CHSRPQMEDEEE---KKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS
gm000906_Glyma0 SHSKPVGEDQDEGKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS
                .**:*  **::*   *:*.*****************************************

AT4G00050.1     SKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMSLMSNPMGLGMG
gm000906_Glyma0 SKSDKASMLDEVIEYLKQLQAQLQMINRINMSSMMLPLTM--QQQLQMSMMS-PMGMGLG
                **:*******************:.*:.*:**.*****::*  *******:** ***:*:*

AT4G00050.1     MGMPGLGL---LDLNSMNRAAASAPNIHANMMPNPFLPMNCPSWDASS---NDSRFQ-SP
gm000906_Glyma0 MGM-GMGMGMGMDMNSMNR--AHIPGIPPVLHPSAFMPM-AASWDAAAAAGGGDRLQGTP
                *** *:*:   :*:*****  *  *.* . : *..*:** ..****::   ...*:* :*

AT4G00050.1     --LIPDPMSAFLACSTQPTTMEAYSRMATLYQQMQQQLPPPSNPK--
gm000906_Glyma0 ANVMPDPLSTFFGCQSQPMTIDAYSRLAAMYQQLHQ--PPPASGSKN
                  ::***:*:*:.*.:** *::****:*::***::*  ***:. .
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S Q C V P N C H I D D T P A A A T T T V R S - - - T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R V -
gm000906_Glyma0    M S Q C V P S W D V E D N P P P S R V S L R S N S N S T A P D V P M L D Y E V A E L T W E N G Q L S M H G L G L P R V P
 
AT4G00050.1     - - - - T A S S T K Y S - - - T G A G G T L E S I V D Q A T R L P N P - K P T - - - - - - - - - - - - D E L V P W F H H
gm000906_Glyma0    V K P P T A V T N K Y T W E K P R A S G T L E S I V N Q V T S F P H R G K P T P L N G G G G G G V Y G N F R V P W F D P
 
AT4G00050.1     R S S R A - - - A M A M D A L V P C S N L V H E Q Q - - - S K P G G - - - V G - S T R V G S C S D G R T M G G - - - - G
gm000906_Glyma0    H A T A T T T N T V T M D A L V P C S N R E Q S K Q G M E S V P G G T C M V G C S T R V G S C C G G K G A K G H E A T G
 
AT4G00050.1     K R A R V A P E W S - G G G S Q R L T M D T Y D - - - - V G F T S T S M G S H D N - - - - - - - - - - - T I D D H D S V
gm000906_Glyma0    R D Q S V S G S A T F G R D S K H V T L D T C D R E F G V G F T S T S I N S L E N T S S A K H C T K T T T V D D H D S V
 
AT4G00050.1     C H S R P Q M E D E E E - - - K K A G G K S S V S T K R S R A A A I H N Q S E R K R R D K I N Q R M K T L Q K L V P N S
gm000906_Glyma0    S H S K P V G E D Q D E G K K K R A N G K S S V S T K R S R A A A I H N Q S E R K R R D K I N Q R M K T L Q K L V P N S
 
AT4G00050.1     S K T D K A S M L D E V I E Y L K Q L Q A Q V S M M S R M N M P S M M L P M A M Q Q Q Q Q L Q M S L M S N P M G L G M G
gm000906_Glyma0    S K S D K A S M L D E V I E Y L K Q L Q A Q L Q M I N R I N M S S M M L P L T M - - Q Q Q L Q M S M M S - P M G M G L G
 
AT4G00050.1     M G M P G L G L - - - L D L N S M N R A A A S A P N I H A N M M P N P F L P M N C P S W D A S S - - - N D S R F Q - S P
gm000906_Glyma0    M G M - G M G M G M G M D M N S M N R - - A H I P G I P P V L H P S A F M P M - A A S W D A A A A A G G G D R L Q G T P
 
AT4G00050.1     - - L I P D P M S A F L A C S T Q P T T M E A Y S R M A T L Y Q Q M Q Q Q L P P P S N P K - -
gm000906_Glyma0    A N V M P D P L S T F F G C Q S Q P M T I D A Y S R L A A M Y Q Q L H Q - - P P P A S G S K N
 
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