fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000906 not found in 458aa AT4G00050.1 1st_1st 0.452418096 Ia
Gm031046 not found in 458aa AT4G00050.1 not_1st 0.414976599 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00050.1     MSQCVPNCHIDDTPAAATTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPRV-
gm000906_Glyma0 MSQCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVP
gm031046_Glyma1 MSQCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVP
                ******. .::*.*..: .::**   :**.*:*:***************.:**** *** 

AT4G00050.1     ----TASSTKYS---TGAGGTLESIVDQATRLPN---PKPTDE------------LVPWF
gm000906_Glyma0 VKPPTAVTNKYTWEKPRASGTLESIVNQVTSFPHRGKPTPLNG--GGGGGVYGNFRVPWF
gm031046_Glyma1 VKPPTAATNKYTWEKPRGSGTLESIVNQATSFSHQEKPRPLNGDSGGGGGVYGNFMVPWF
                    ** :.**:   . ..*******:*.* :.:   * * :              ****

AT4G00050.1     HHRS-------SRAAMAMDALVPCSNLVHEQ------QSKPGG---VG-STRVGSCSDGR
gm000906_Glyma0 DPHA----TATTTNTVTMDALVPCSN--REQ-SKQGMESVPGGTCMVGCSTRVGSCCGGK
gm031046_Glyma1 DPHAAATTTTTTTNTMTMDALVPCSN--REQGKKKGMESGP-GTCMVGCSTRVGSCCGGK
                . ::       :  :::*********  :**      :* * *   ** *******..*:

AT4G00050.1     TMGG----GKRARVAPEWS-GGGSQRLTMDTYD----VGFTSTSMGSHDN----------
gm000906_Glyma0 GAKGHEATGRDQSVSGSATFGRDSKHVTLDTCDREFGVGFTSTSINSLENTSSAKHCTKT
gm031046_Glyma1 GAKGHEASGRDQSVSGSATFGRDSKHVTLDTCDREFGVAFTSTSINSLENTSYAKHCTKT
                   *    *:   *: . : * .*:::*:** *    *.*****:.* :*          

AT4G00050.1     -TIDDHDSVCHSRPQMEDEEE---KKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMK
gm000906_Glyma0 TTVDDHDSVSHSKPVGEDQDEGKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMK
gm031046_Glyma1 TTIEEHDSVSHSKPMGEDGDEEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMK
                 *:::****.**:*  ** :*   *:*.********************************

AT4G00050.1     TLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMSLM
gm000906_Glyma0 TLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMINRINMSSMMLPLTM--QQQLQMSMM
gm031046_Glyma1 TLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRINMSSMMLPLTM--QQQLQMSMM
                ***********:*******************:.*:.*:**.*****::*  *******:*

AT4G00050.1     SNPMGLGMGMGMPGLGL---LDLNSMNRAAASAPNIHANMMPNPFLPMNCPSWDA-----
gm000906_Glyma0 S-PMGMGLGMGM-GMGMGMGMDMNSMNR--AHIPGIPPVLHPSAFMPM-AASWDA--AAA
gm031046_Glyma1 S-PMGMGLGMGM-GMGMGMGMDMNSMNR--ANIPGIPPVLHPSAFMPM-AASWDAAVAAA
                * ***:*:**** *:*:   :*:*****  *  *.* . : *..*:** ..****     

AT4G00050.1     SSNDSRFQ---SPLIPDPMSAFLACSTQP-TTMEAYSRMATLYQQMQQQLPPPSNPK
gm000906_Glyma0 AGGGDRLQGTPANVMPDPLSTFFGCQSQP-MTIDAYSRLAAMYQQLHQPPPASGSKN
gm031046_Glyma1 AGGGDRLQGTPASVMPDPLSTIFGCQSQLYISMEEYSKLIRI--QLYLAF-------
                :....*:*   : ::***:*:::.*.:*   ::: **::  :  *:
BoxShade v3.31 C (beta, 970507) Output
AT4G00050.1     M S Q C V P N C H I D D T P A A A T T T V R S - - - T T A A D I P I L D Y E V A E L T W E N G Q L G L H G L G P P R V -
gm000906_Glyma0    M S Q C V P S W D V E D N P P P S R V S L R S N S N S T A P D V P M L D Y E V A E L T W E N G Q L S M H G L G L P R V P
gm031046_Glyma1    M S Q C V P S W D V E D N P P P S R V S L R S N S N S T A P D V P M L D Y E V A E L T W E N G Q L S M H G L G L P R V P
 
AT4G00050.1     - - - - T A S S T K Y S - - - T G A G G T L E S I V D Q A T R L P N - - - P K P T D E - - - - - - - - - - - - L V P W F
gm000906_Glyma0    V K P P T A V T N K Y T W E K P R A S G T L E S I V N Q V T S F P H R G K P T P L N G - - G G G G G V Y G N F R V P W F
gm031046_Glyma1    V K P P T A A T N K Y T W E K P R G S G T L E S I V N Q A T S F S H Q E K P R P L N G D S G G G G G V Y G N F M V P W F
 
AT4G00050.1     H H R S - - - - - - - S R A A M A M D A L V P C S N L V H E Q - - - - - - Q S K P G G - - - V G - S T R V G S C S D G R
gm000906_Glyma0    D P H A - - - - T A T T T N T V T M D A L V P C S N - - R E Q - S K Q G M E S V P G G T C M V G C S T R V G S C C G G K
gm031046_Glyma1    D P H A A A T T T T T T T N T M T M D A L V P C S N - - R E Q G K K K G M E S G P - G T C M V G C S T R V G S C C G G K
 
AT4G00050.1     T M G G - - - - G K R A R V A P E W S - G G G S Q R L T M D T Y D - - - - V G F T S T S M G S H D N - - - - - - - - - -
gm000906_Glyma0    G A K G H E A T G R D Q S V S G S A T F G R D S K H V T L D T C D R E F G V G F T S T S I N S L E N T S S A K H C T K T
gm031046_Glyma1    G A K G H E A S G R D Q S V S G S A T F G R D S K H V T L D T C D R E F G V A F T S T S I N S L E N T S Y A K H C T K T
 
AT4G00050.1     - T I D D H D S V C H S R P Q M E D E E E - - - K K A G G K S S V S T K R S R A A A I H N Q S E R K R R D K I N Q R M K
gm000906_Glyma0    T T V D D H D S V S H S K P V G E D Q D E G K K K R A N G K S S V S T K R S R A A A I H N Q S E R K R R D K I N Q R M K
gm031046_Glyma1    T T I E E H D S V S H S K P M G E D G D E E K K K R A N G K S S V S T K R S R A A A I H N Q S E R K R R D K I N Q R M K
 
AT4G00050.1     T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V S M M S R M N M P S M M L P M A M Q Q Q Q Q L Q M S L M
gm000906_Glyma0    T L Q K L V P N S S K S D K A S M L D E V I E Y L K Q L Q A Q L Q M I N R I N M S S M M L P L T M - - Q Q Q L Q M S M M
gm031046_Glyma1    T L Q K L V P N S S K T D K A S M L D E V I E Y L K Q L Q A Q V Q M M N R I N M S S M M L P L T M - - Q Q Q L Q M S M M
 
AT4G00050.1     S N P M G L G M G M G M P G L G L - - - L D L N S M N R A A A S A P N I H A N M M P N P F L P M N C P S W D A - - - - -
gm000906_Glyma0    S - P M G M G L G M G M - G M G M G M G M D M N S M N R - - A H I P G I P P V L H P S A F M P M - A A S W D A - - A A A
gm031046_Glyma1    S - P M G M G L G M G M - G M G M G M G M D M N S M N R - - A N I P G I P P V L H P S A F M P M - A A S W D A A V A A A
 
AT4G00050.1     S S N D S R F Q - - - S P L I P D P M S A F L A C S T Q P - T T M E A Y S R M A T L Y Q Q M Q Q Q L P P P S N P K
gm000906_Glyma0    A G G G D R L Q G T P A N V M P D P L S T F F G C Q S Q P - M T I D A Y S R L A A M Y Q Q L H Q P P P A S G S K N
gm031046_Glyma1    A G G G D R L Q G T P A S V M P D P L S T I F G C Q S Q L Y I S M E E Y S K L I R I - - Q L Y L A F - - - - - - -
 
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