fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018243 not found in 266aa AT2G45190.1 1st_not 0.491048593 II
Sb029682 not found in 431aa AT4G00180.1 not_1st 0.468030690 II
Gm001387 not found in 215aa AT2G45190.1 1st_not 0.598465473 II
Pt016250 not found in 212aa AT2G45190.1 1st_not 0.593350383 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00180.1     -----------MSSMSMSSSSAPAFPPD----HF----------SSTDQLCYVHCSFCDT
Os018243_Os04t0 ----------------MMSSAPETFSLDHLSQH---QQQQPPPLAEQEQLCYVHCNFCDT
pt016250_POPTR_ ----------------MASSSA-AFSPD----HL----------SSSDQLCYVHCNFCDT
gm001387_Glyma0 ----------------MSSSST-SFSPD---QHL----------SPSDQLCYVHCNFCDT
Sb029682_Sorbi1 AAQARRSTGSFASFGAMMSSVPETFNLDQ--QHLVVQQQQPPP-AEQEQICYVHCSYCDT
                                * ** . :*  *    *           :  :*:*****.:***

AT4G00180.1     VLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPS----VSN----LGHSFLPPPP
Os018243_Os04t0 ILAVGVPCSSLFKTVTVRCGHCANLLS--VNLRGLLLPAAASTANQLP--FGQALLSPT-
pt016250_POPTR_ VLAVSVPCSSLFKTVTVRCGHCTNLFS--VNMRS-LLPA----ANQFY--LGHGFFNPQ-
gm001387_Glyma0 VLAVSVPCTSLFKTVTVRCGHCTNLLS--VNMRGLLLPS----ANQLH--LGHSFFTPQ-
Sb029682_Sorbi1 ILAVGVPCSSLFQTVTVRCGHCSNLLY--VNLRALLLPAA---ANQLPPFGGQALLSPT-
                :***.** :***:*********:**:   *.:*. ***:    ..:     *:.:: *  

AT4G00180.1     PPPPPNLLE--EMRSGGQNINM-----------NMMMSHHASAHHPNEHLVMATRN----
Os018243_Os04t0 --SPHGLLD--EVPSFQAPASLM--TEQASPNVSSITSSNSSCANNAPATSMASAA----
pt016250_POPTR_ ----INILE--GMRSTGAPPS-------------LMINQ----PNPNE-SVMPIR-----
gm001387_Glyma0 -----NLLE--EIRN--APST------------NMMMNQ---LPNPND-LVMSTMR----
Sb029682_Sorbi1 --SPHGLLDAETMSSFQAPRSLQPSTDPPSACVSTITSINNTCGGGNSASAMSSMAPPPP
                     .:*:   : .     .              : .             *.       

AT4G00180.1     GRSVDHLQEMPR-PPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAK
Os018243_Os04t0 NKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAK
pt016250_POPTR_ -----GVEEIPK-PPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK
gm001387_Glyma0 G----GPEETPK-PPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK
Sb029682_Sorbi1 AKPALLEPQLPKSAASGNKTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAK
                        : *: ..  *:..***************:*******.****:**********

AT4G00180.1     NWAHFPHIHFGLMADHPPTKKANVRQQEGE-DGMMGREGFY-------------GSAANV
Os018243_Os04t0 NWAHFPHIHFGLMPD-QGLKKTGIQSQDGAGECMLFKDGLY----AAAAAAAAATAASSM
pt016250_POPTR_ NWAHFPHIHFGLMPD-QPVKKTNVRQQEGE-DVLM-KDGFF--------------APANV
gm001387_Glyma0 NWAHFPHIHFGLMPDNQPVKKANVR-QEAE-DVLM-KDGFF--------------APANV
Sb029682_Sorbi1 NWAHFPHIHFGLMPD-QGLKKNPMQNQEGA-ECMLFKDGLYAAAAAAAAAAAAATAASGM
                *************.*    **  :: *:.  : :: ::*::              :.:.:

AT4G00180.1     GVAHN
Os018243_Os04t0 GVTPF
pt016250_POPTR_ GVTPY
gm001387_Glyma0 GVSPY
Sb029682_Sorbi1 GISPF
                *::
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     - - - - - - - - - - - M S S M S M S S S S A P A F P P D - - - - H F - - - - - - - - - - S S T D Q L C Y V H C S F C D T
Os018243_Os04t0    - - - - - - - - - - - - - - - - M M S S A P E T F S L D H L S Q H - - - Q Q Q Q P P P L A E Q E Q L C Y V H C N F C D T
pt016250_POPTR_    - - - - - - - - - - - - - - - - M A S S S A - A F S P D - - - - H L - - - - - - - - - - S S S D Q L C Y V H C N F C D T
gm001387_Glyma0    - - - - - - - - - - - - - - - - M S S S S T - S F S P D - - - Q H L - - - - - - - - - - S P S D Q L C Y V H C N F C D T
Sb029682_Sorbi1    A A Q A R R S T G S F A S F G A M M S S V P E T F N L D Q - - Q H L V V Q Q Q Q P P P - A E Q E Q I C Y V H C S Y C D T
 
AT4G00180.1     V L A V S V P P S S L F K T V T V R C G H C S N L L S V T V S M R A L L L P S - - - - V S N - - - - L G H S F L P P P P
Os018243_Os04t0    I L A V G V P C S S L F K T V T V R C G H C A N L L S - - V N L R G L L L P A A A S T A N Q L P - - F G Q A L L S P T -
pt016250_POPTR_    V L A V S V P C S S L F K T V T V R C G H C T N L F S - - V N M R S - L L P A - - - - A N Q F Y - - L G H G F F N P Q -
gm001387_Glyma0    V L A V S V P C T S L F K T V T V R C G H C T N L L S - - V N M R G L L L P S - - - - A N Q L H - - L G H S F F T P Q -
Sb029682_Sorbi1    I L A V G V P C S S L F Q T V T V R C G H C S N L L Y - - V N L R A L L L P A A - - - A N Q L P P F G G Q A L L S P T -
 
AT4G00180.1     P P P P P N L L E - - E M R S G G Q N I N M - - - - - - - - - - - N M M M S H H A S A H H P N E H L V M A T R N - - - -
Os018243_Os04t0    - - S P H G L L D - - E V P S F Q A P A S L M - - T E Q A S P N V S S I T S S N S S C A N N A P A T S M A S A A - - - -
pt016250_POPTR_    - - - - I N I L E - - G M R S T G A P P S - - - - - - - - - - - - - L M I N Q - - - - P N P N E - S V M P I R - - - - -
gm001387_Glyma0    - - - - - N L L E - - E I R N - - A P S T - - - - - - - - - - - - N M M M N Q - - - L P N P N D - L V M S T M R - - - -
Sb029682_Sorbi1    - - S P H G L L D A E T M S S F Q A P R S L Q P S T D P P S A C V S T I T S I N N T C G G G N S A S A M S S M A P P P P
 
AT4G00180.1     G R S V D H L Q E M P R - P P P A N R P P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K
Os018243_Os04t0    N K A T Q R E P Q Q P K N A P S A N R T S E K R Q R V P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S A A A K
pt016250_POPTR_    - - - - - G V E E I P K - P P V V N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K
gm001387_Glyma0    G - - - - G P E E T P K - P P S A N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K
Sb029682_Sorbi1    A K P A L L E P Q L P K S A A S G N K T S E K R Q R V P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S A A A K
 
AT4G00180.1     N W A H F P H I H F G L M A D H P P T K K A N V R Q Q E G E - D G M M G R E G F Y - - - - - - - - - - - - - G S A A N V
Os018243_Os04t0    N W A H F P H I H F G L M P D - Q G L K K T G I Q S Q D G A G E C M L F K D G L Y - - - - A A A A A A A A A T A A S S M
pt016250_POPTR_    N W A H F P H I H F G L M P D - Q P V K K T N V R Q Q E G E - D V L M - K D G F F - - - - - - - - - - - - - - A P A N V
gm001387_Glyma0    N W A H F P H I H F G L M P D N Q P V K K A N V R - Q E A E - D V L M - K D G F F - - - - - - - - - - - - - - A P A N V
Sb029682_Sorbi1    N W A H F P H I H F G L M P D - Q G L K K N P M Q N Q E G A - E C M L F K D G L Y A A A A A A A A A A A A A T A A S G M
 
AT4G00180.1     G V A H N
Os018243_Os04t0    G V T P F
pt016250_POPTR_    G V T P Y
gm001387_Glyma0    G V S P Y
Sb029682_Sorbi1    G I S P F
 
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