fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008985 not found in 256aa AT2G45190.1 not_not 0.478260869 III
Gm006033 not found in 216aa AT2G45190.1 not_not 0.585677749 III
Gm011376 not found in 214aa AT2G45190.1 not_not 0.534526854 III
Gm047022 not found in 215aa AT2G45190.1 not_not 0.534526854 III
Gm034118 not found in 181aa AT1G08465.1 not_not 0.406649616 III
Gm037785 not found in 181aa AT1G08465.1 not_not 0.404092071 III
Pt010908 MSSSSTLSLDLLPSSE in 6/213 AT2G45190.1 not_not 0.547314578 III
Pt033007 not found in 214aa AT2G45190.1 not_not 0.524296675 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00180.1     MSSMSMSSSSAPAFPPD--HF---SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCG
gm011376_Glyma0 ---MSSSSTT---LSLD--HL---PPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCG
gm047022_Glyma1 ---MSSSSST---LSLD--HL---PPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCG
gm037785_Glyma1 -------------MSMDM------MATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCG
gm006033_Glyma0 ---MSSSSTS---FSPDQQHL---SPSDQLCYVHCNFCDTVLAVSVPCTSLFKNVTVRCG
pt033007_POPTR_ ----MSSSSS---LSLD--HL---PPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCG
gm034118_Glyma1 -------------MSMDM------MATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCG
Os008985_Os02t0 ---MSSSSSSSAVFPLD--HLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCG
pt010908_POPTR_ ----MSSSST---LSLD--LL---PSSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCG
                             :. *        .::::*****. *:* ***.** :**:. ******

AT4G00180.1     HCSNLLSVTVSMRALL--LPSVS-------NLGHSFLPPPPPPPPPNLL-EEMRS-GGQN
gm011376_Glyma0 HCTNLLP--VNMRGLL--MPS-----PTQFHLGHSFFSPS-----HNLL-EEIPN-PSPN
gm047022_Glyma1 HCTNLLP--VNMRGLL--MPS-----PTQFHLGHSFFSPS-----HNLL-EEIPN-PTPN
gm037785_Glyma1 HCANLLT--VNMGASLQTFPSQD---TTQLQRQHLSVQEACS--------KELGS-----
gm006033_Glyma0 HCTNLLS--VNMRGLL--LPS-----ANQLHLGHTFFTP------QNLM-EEIRNAPSTN
pt033007_POPTR_ HCTNLLP--VNMRGLF--LPS-----ASQFPLGHNLYSPS-----HNLLDDQIPN-PTPN
gm034118_Glyma1 HCANLLT--VNMGASLQTFPSQD---TTQLQRQHLSVQEACS--------KELGS-----
Os008985_Os02t0 HCANLLS--VNLRGLL--LPAPAPAPANQLHFGPSLLSPTS---PHGLL-DEVAF-QTPS
pt010908_POPTR_ HCTNLLP--VNMRGLL--LPS-----ANQFHLGHSFFSPS-----HNLL-DEIPN-PTPN
                **:***.  *.: . :  :*:                             .::       

AT4G00180.1     INMNMMMS--------HHASAHHPNEHLVM-----ATRNGRSVDHLQEMPR--PPPANRP
gm011376_Glyma0 FLMNQTNLS-------------ASNEFSM------PARIAAD-----ELPR---PIMNRP
gm047022_Glyma1 FLMNQTNFS-------------ASHEFSM------PARTAAD-----ELPR--PPITNRP
gm037785_Glyma1 -----------SS----------------------KCKTFETVDH-DQQPR-IPPI--RP
gm006033_Glyma0 IMMNQLPN---------------PNDLVMS-----TMRGGPE-----ETPK--PPSANRP
pt033007_POPTR_ FLINQTHV----------------NDFSV------TVRGMAD----HELPR--PPVIHRP
gm034118_Glyma1 -----------SS----------------------KCKSFETVDH-EQQPR-IPPI--RP
Os008985_Os02t0 LLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEP------ELPKNAPASANRP
pt010908_POPTR_ FLINQTNV----------------NDFSV------PVRGMAD----HELPR--PPVINRP
                                                     :         : *:   .   **

AT4G00180.1     PEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTK
gm011376_Glyma0 PEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QTVK
gm047022_Glyma1 PEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QTVK
gm037785_Glyma1 PEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLD--GNK
gm006033_Glyma0 PEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDNQPVK
pt033007_POPTR_ PEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD-QAMK
gm034118_Glyma1 PEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLD--GNK
Os008985_Os02t0 PEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD-QGFK
pt010908_POPTR_ PEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD-QMVK
                ****************:******: ****:******:***************  *    *

AT4G00180.1     KANVRQQEGEDGMMGREGFY-------GSAANVGVAHN-
gm011376_Glyma0 KTNVCQQEGEEVLM-KDGFY--------ASANVGV-SPY
gm047022_Glyma1 KTNVCQQDGEEVLM-KDGFY--------ASANVGV-SPY
gm037785_Glyma1 QAKLDQGDGTQK---SNGFY-------------------
gm006033_Glyma0 KANVR-QEAEDVLM-KDGFF--------APANVGV-SPY
pt033007_POPTR_ KNNVRQQEGEDVLI-NDGFF--------ASSNVGVTTPY
gm034118_Glyma1 QAKLDQGDGTQK---SNGFY-------------------
Os008985_Os02t0 KTFKPQDGSEDILL-KDSLYAAAAAAAAAAANMGV-TPF
pt010908_POPTR_ KTNVRQQEGEDVLM-KDGFF--------SSANAGVPTPY
                :       . :     :.::
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     M S S M S M S S S S A P A F P P D - - H F - - - S S T D Q L C Y V H C S F C D T V L A V S V P P S S L F K T V T V R C G
gm011376_Glyma0    - - - M S S S S T T - - - L S L D - - H L - - - P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G
gm047022_Glyma1    - - - M S S S S S T - - - L S L D - - H L - - - P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G
gm037785_Glyma1    - - - - - - - - - - - - - M S M D M - - - - - - M A T E R V C Y V H C N F C N T T L A V S V P C S S L L T I V T V R C G
gm006033_Glyma0    - - - M S S S S T S - - - F S P D Q Q H L - - - S P S D Q L C Y V H C N F C D T V L A V S V P C T S L F K N V T V R C G
pt033007_POPTR_    - - - - M S S S S S - - - L S L D - - H L - - - P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G
gm034118_Glyma1    - - - - - - - - - - - - - M S M D M - - - - - - M A T E R V C Y V H C N F C N T T L A V S V P C S S L L T I V T V R C G
Os008985_Os02t0    - - - M S S S S S S S A V F P L D - - H L A A P S P T E Q L C Y V H C N C C D T I L A V G V P C S S L F K T V T V R C G
pt010908_POPTR_    - - - - M S S S S T - - - L S L D - - L L - - - P S S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G
 
AT4G00180.1     H C S N L L S V T V S M R A L L - - L P S V S - - - - - - - N L G H S F L P P P P P P P P P N L L - E E M R S - G G Q N
gm011376_Glyma0    H C T N L L P - - V N M R G L L - - M P S - - - - - P T Q F H L G H S F F S P S - - - - - H N L L - E E I P N - P S P N
gm047022_Glyma1    H C T N L L P - - V N M R G L L - - M P S - - - - - P T Q F H L G H S F F S P S - - - - - H N L L - E E I P N - P T P N
gm037785_Glyma1    H C A N L L T - - V N M G A S L Q T F P S Q D - - - T T Q L Q R Q H L S V Q E A C S - - - - - - - - K E L G S - - - - -
gm006033_Glyma0    H C T N L L S - - V N M R G L L - - L P S - - - - - A N Q L H L G H T F F T P - - - - - - Q N L M - E E I R N A P S T N
pt033007_POPTR_    H C T N L L P - - V N M R G L F - - L P S - - - - - A S Q F P L G H N L Y S P S - - - - - H N L L D D Q I P N - P T P N
gm034118_Glyma1    H C A N L L T - - V N M G A S L Q T F P S Q D - - - T T Q L Q R Q H L S V Q E A C S - - - - - - - - K E L G S - - - - -
Os008985_Os02t0    H C A N L L S - - V N L R G L L - - L P A P A P A P A N Q L H F G P S L L S P T S - - - P H G L L - D E V A F - Q T P S
pt010908_POPTR_    H C T N L L P - - V N M R G L L - - L P S - - - - - A N Q F H L G H S F F S P S - - - - - H N L L - D E I P N - P T P N
 
AT4G00180.1     I N M N M M M S - - - - - - - - H H A S A H H P N E H L V M - - - - - A T R N G R S V D H L Q E M P R - - P P P A N R P
gm011376_Glyma0    F L M N Q T N L S - - - - - - - - - - - - - A S N E F S M - - - - - - P A R I A A D - - - - - E L P R - - - P I M N R P
gm047022_Glyma1    F L M N Q T N F S - - - - - - - - - - - - - A S H E F S M - - - - - - P A R T A A D - - - - - E L P R - - P P I T N R P
gm037785_Glyma1    - - - - - - - - - - - S S - - - - - - - - - - - - - - - - - - - - - - K C K T F E T V D H - D Q Q P R - I P P I - - R P
gm006033_Glyma0    I M M N Q L P N - - - - - - - - - - - - - - - P N D L V M S - - - - - T M R G G P E - - - - - E T P K - - P P S A N R P
pt033007_POPTR_    F L I N Q T H V - - - - - - - - - - - - - - - - N D F S V - - - - - - T V R G M A D - - - - H E L P R - - P P V I H R P
gm034118_Glyma1    - - - - - - - - - - - S S - - - - - - - - - - - - - - - - - - - - - - K C K S F E T V D H - E Q Q P R - I P P I - - R P
Os008985_Os02t0    L L M E Q A A S A S L S S I T G R S S S S C A S N A P A M Q M P P A K P V Q Q E P - - - - - - E L P K N A P A S A N R P
pt010908_POPTR_    F L I N Q T N V - - - - - - - - - - - - - - - - N D F S V - - - - - - P V R G M A D - - - - H E L P R - - P P V I N R P
 
AT4G00180.1     P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M A D H P P T K
gm011376_Glyma0    P E K R Q R V P S A Y N R F I K D E I Q R I K S V N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D - Q T V K
gm047022_Glyma1    P E K R Q R V P S A Y N R F I K D E I Q R I K S V N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D - Q T V K
gm037785_Glyma1    P E K R Q R V P S A Y N R F I K E E I Q R I K A S N P D I S H R E A F S T A A K N W A H F P H I H F G L K L D - - G N K
gm006033_Glyma0    P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D N Q P V K
pt033007_POPTR_    P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D - Q A M K
gm034118_Glyma1    P E K R Q R V P S A Y N R F I K E E I Q R I K A S N P D I S H R E A F S T A A K N W A H F P H I H F G L K L D - - G N K
Os008985_Os02t0    P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D - Q G F K
pt010908_POPTR_    P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D - Q M V K
 
AT4G00180.1     K A N V R Q Q E G E D G M M G R E G F Y - - - - - - - G S A A N V G V A H N -
gm011376_Glyma0    K T N V C Q Q E G E E V L M - K D G F Y - - - - - - - - A S A N V G V - S P Y
gm047022_Glyma1    K T N V C Q Q D G E E V L M - K D G F Y - - - - - - - - A S A N V G V - S P Y
gm037785_Glyma1    Q A K L D Q G D G T Q K - - - S N G F Y - - - - - - - - - - - - - - - - - - -
gm006033_Glyma0    K A N V R - Q E A E D V L M - K D G F F - - - - - - - - A P A N V G V - S P Y
pt033007_POPTR_    K N N V R Q Q E G E D V L I - N D G F F - - - - - - - - A S S N V G V T T P Y
gm034118_Glyma1    Q A K L D Q G D G T Q K - - - S N G F Y - - - - - - - - - - - - - - - - - - -
Os008985_Os02t0    K T F K P Q D G S E D I L L - K D S L Y A A A A A A A A A A A N M G V - T P F
pt010908_POPTR_    K T N V R Q Q E G E D V L M - K D G F F - - - - - - - - S S A N A G V P T P Y
 
0