fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027997 not found in 453aa AT4G00180.1 1st_1st 0.503836317 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00180.1     ----------------MSS---------------------------------MSMSSSSA
Sb027997_Sorbi1 PDRARRRVLDDDSSLHRSSDRSIFSTASAPQVDQVVVGASCYISVLLGDRIMMSSSSSSS
                                 **                                 ** ****:

AT4G00180.1     PAFPPDHF--SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRA
Sb027997_Sorbi1 AAFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLS--VNLRG
                .*** **:  *.*:*******. ***:***.** **************:****  *.:*.

AT4G00180.1     LLLPSVS------NLGHSFLPPPPPP--------PPPNLLEEMRSGGQNINMNMMM---S
Sb027997_Sorbi1 LLLPPAAPPANHLNFGHSLLSPTSPHGLLDELALQAPSLLMEQASA--NLSSSTMTGGSN
                ****..:      *:***:*.*..*          .*.** *  *.  *:. . *    .

AT4G00180.1     HHASAHHPNEHLVMATRNGRSVDHLQEMPR--PPPANRPPEKRQRVPSAYNRFIKEEIQR
Sb027997_Sorbi1 SSCASNLPAGPMPAA----KPVQQEPELPKTTAPSVNRPPEKRQRVPSAYNRFIKDEIQR
                  .::: *   :  *    :.*::  *:*:  .*..*******************:****

AT4G00180.1     IKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYG
Sb027997_Sorbi1 IKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQ--GLKKTFKTQDGAEDMLLKDGLYA
                ********:***********************.*:    * ..: *:* :.*: ::*:*.

AT4G00180.1     SAANVGVAHN-----
Sb027997_Sorbi1 AAAAAAAANMGITPF
                :** ...*:
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     - - - - - - - - - - - - - - - - M S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S M S S S S A
Sb027997_Sorbi1    P D R A R R R V L D D D S S L H R S S D R S I F S T A S A P Q V D Q V V V G A S C Y I S V L L G D R I M M S S S S S S S
 
AT4G00180.1     P A F P P D H F - - S S T D Q L C Y V H C S F C D T V L A V S V P P S S L F K T V T V R C G H C S N L L S V T V S M R A
Sb027997_Sorbi1    A A F P L D H L A P S P T E Q L C Y V H C N C C D T I L A V G V P C S S L F K T V T V R C G H C A N L L S - - V N L R G
 
AT4G00180.1     L L L P S V S - - - - - - N L G H S F L P P P P P P - - - - - - - - P P P N L L E E M R S G G Q N I N M N M M M - - - S
Sb027997_Sorbi1    L L L P P A A P P A N H L N F G H S L L S P T S P H G L L D E L A L Q A P S L L M E Q A S A - - N L S S S T M T G G S N
 
AT4G00180.1     H H A S A H H P N E H L V M A T R N G R S V D H L Q E M P R - - P P P A N R P P E K R Q R V P S A Y N R F I K E E I Q R
Sb027997_Sorbi1    S S C A S N L P A G P M P A A - - - - K P V Q Q E P E L P K T T A P S V N R P P E K R Q R V P S A Y N R F I K D E I Q R
 
AT4G00180.1     I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M A D H P P T K K A N V R Q Q E G E D G M M G R E G F Y G
Sb027997_Sorbi1    I K A G N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D Q - - G L K K T F K T Q D G A E D M L L K D G L Y A
 
AT4G00180.1     S A A N V G V A H N - - - - -
Sb027997_Sorbi1    A A A A A A A A N M G I T P F
 
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