fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018243 not found in 266aa AT2G45190.1 1st_not 0.491048593 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00180.1     MSSMSMSSSSAPAFPPDHFSS-----------TDQLCYVHCSFCDTVLAVSVPPSSLFKT
Os018243_Os04t0 -----MMSSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKT
                     * **:. :*. **:*.            :*******.****:***.** ******

AT4G00180.1     VTVRCGHCSNLLSVTVSMRALLLPSVSN------LGHSFLPPPPP----------PPPPN
Os018243_Os04t0 VTVRCGHCANLLS--VNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPAS
                ********:****  *.:*.****:.:.      :*:::*.*..*           .*..

AT4G00180.1     LLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPR-PPPANRPPEK
Os018243_Os04t0 LMTEQASP----NVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEK
                *: *  *     *:. : * ::*. :      **:  .::.::  : *: .*.***..**

AT4G00180.1     RQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKAN
Os018243_Os04t0 RQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQ-GLKKTG
                *************:*******.****:***********************.*:   **:.

AT4G00180.1     VRQQEGE-DGMMGREGFYGSAANVGVAHN---------
Os018243_Os04t0 IQSQDGAGECMLFKDGLYAAAAAAAAATAASSMGVTPF
                ::.*:*  : *: ::*:*.:** ...*
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     M S S M S M S S S S A P A F P P D H F S S - - - - - - - - - - - T D Q L C Y V H C S F C D T V L A V S V P P S S L F K T
Os018243_Os04t0    - - - - - M M S S A P E T F S L D H L S Q H Q Q Q Q P P P L A E Q E Q L C Y V H C N F C D T I L A V G V P C S S L F K T
 
AT4G00180.1     V T V R C G H C S N L L S V T V S M R A L L L P S V S N - - - - - - L G H S F L P P P P P - - - - - - - - - - P P P P N
Os018243_Os04t0    V T V R C G H C A N L L S - - V N L R G L L L P A A A S T A N Q L P F G Q A L L S P T S P H G L L D E V P S F Q A P A S
 
AT4G00180.1     L L E E M R S G G Q N I N M N M M M S H H A S A H H P N E H L V M A T R N G R S V D H L Q E M P R - P P P A N R P P E K
Os018243_Os04t0    L M T E Q A S P - - - - N V S S I T S S N S S C A N N A P A T S M A S A A N K A T Q R E P Q Q P K N A P S A N R T S E K
 
AT4G00180.1     R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M A D H P P T K K A N
Os018243_Os04t0    R Q R V P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D Q - G L K K T G
 
AT4G00180.1     V R Q Q E G E - D G M M G R E G F Y G S A A N V G V A H N - - - - - - - - -
Os018243_Os04t0    I Q S Q D G A G E C M L F K D G L Y A A A A A A A A A T A A S S M G V T P F
 
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