fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008985 not found in 256aa AT2G45190.1 not_not 0.478260869 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00180.1     MSSMSMSSSSAPAFPPDHF---SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHC
Os008985_Os02t0 ---MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHC
                   ** ****:..** **:   *.*:*******. ***:***.** **************

AT4G00180.1     SNLLSVTVSMRALLLPSVS-------NLGHSFLPPPPPP--------PPPNLLEEMRSGG
Os008985_Os02t0 ANLLS--VNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASA
                :****  *.:*.****: :       ::* *:*.*..*          .*.** *  :..

AT4G00180.1     QNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPR--PPPANRPPEKRQRVPSAY
Os008985_Os02t0 SLSSITGRSSSSCASNAP----AMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAY
                .  .:.   *  .::: *    .*    .:.*::  *:*:  *..***************

AT4G00180.1     NRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGED
Os008985_Os02t0 NRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQ--GFKKTFKPQDGSE
                *****:************************************.*:    * ..: *:*.:

AT4G00180.1     GMMGREGFY-------GSAANVGVAHN
Os008985_Os02t0 DILLKDSLYAAAAAAAAAAANMGVTPF
                .:: ::.:*       .:***:**:
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     M S S M S M S S S S A P A F P P D H F - - - S S T D Q L C Y V H C S F C D T V L A V S V P P S S L F K T V T V R C G H C
Os008985_Os02t0    - - - M S S S S S S S A V F P L D H L A A P S P T E Q L C Y V H C N C C D T I L A V G V P C S S L F K T V T V R C G H C
 
AT4G00180.1     S N L L S V T V S M R A L L L P S V S - - - - - - - N L G H S F L P P P P P P - - - - - - - - P P P N L L E E M R S G G
Os008985_Os02t0    A N L L S - - V N L R G L L L P A P A P A P A N Q L H F G P S L L S P T S P H G L L D E V A F Q T P S L L M E Q A A S A
 
AT4G00180.1     Q N I N M N M M M S H H A S A H H P N E H L V M A T R N G R S V D H L Q E M P R - - P P P A N R P P E K R Q R V P S A Y
Os008985_Os02t0    S L S S I T G R S S S S C A S N A P - - - - A M Q M P P A K P V Q Q E P E L P K N A P A S A N R P P E K R Q R V P S A Y
 
AT4G00180.1     N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M A D H P P T K K A N V R Q Q E G E D
Os008985_Os02t0    N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D Q - - G F K K T F K P Q D G S E
 
AT4G00180.1     G M M G R E G F Y - - - - - - - G S A A N V G V A H N
Os008985_Os02t0    D I L L K D S L Y A A A A A A A A A A A N M G V T P F
 
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