fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018243 not found in 266aa AT2G45190.1 1st_not 0.491048593 II
Os008985 not found in 256aa AT2G45190.1 not_not 0.478260869 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00180.1     MSSMSMSSSSAPAFPPDHFSS-----------TDQLCYVHCSFCDTVLAVSVPPSSLFKT
Os008985_Os02t0 ---MSSSSSSSAVFPLDHLA-----APSP---TEQLCYVHCNCCDTILAVGVPCSSLFKT
Os018243_Os04t0 --MMSSAPET---FSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKT
                   ** :..:   *. **::             :*******. ***:***.** ******

AT4G00180.1     VTVRCGHCSNLLSVTVSMRALLLPS----VSN---LGHSFLPPPPP----------PPPP
Os008985_Os02t0 VTVRCGHCANLLS--VNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEV-AFQTPS
Os018243_Os04t0 VTVRCGHCANLLS--VNLRGLLLPA-AASTANQLPFGQALLSPTSPHGLLDEVPSFQAPA
                ********:****  *.:*.****:     :*   :* ::*.*..*           .*.

AT4G00180.1     NLLEEMRSGGQNINMNMMMS-HHASAHHPNEHLVMATRNGRSVDHLQEMPRPPP--ANRP
Os008985_Os02t0 LLMEQAASA----SLSSITGRSSSSCASNAPAMQMPPA--KPVQQEPELPKNAPASANRP
Os018243_Os04t0 SLMTEQASP----NVSSITS-SNSSCANNAPATSMASAANKATQREPQQPKNAP-SANRT
                 *: :  *     .:. : .   :*.        *..   :..::  : *: .*  ***.

AT4G00180.1     PEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTK
Os008985_Os02t0 PEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQ-GFK
Os018243_Os04t0 SEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQ-GLK
                .***************:*******.****:***********************.*:   *

AT4G00180.1     KANVRQQEGE-DGMMGREGFYG---------SAANVGVAHN
Os008985_Os02t0 KT-FKPQDGS-EDILLKDSLYAAAAAAAA--AAANMGVTPF
Os018243_Os04t0 KTGIQSQDGAGECMLFKDGLYAAAAAAAAATAASSMGVTPF
                *: .: *:*  : :: ::.:*.         :*:.:**:
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     M S S M S M S S S S A P A F P P D H F S S - - - - - - - - - - - T D Q L C Y V H C S F C D T V L A V S V P P S S L F K T
Os008985_Os02t0    - - - M S S S S S S S A V F P L D H L A - - - - - A P S P - - - T E Q L C Y V H C N C C D T I L A V G V P C S S L F K T
Os018243_Os04t0    - - M M S S A P E T - - - F S L D H L S Q H Q Q Q Q P P P L A E Q E Q L C Y V H C N F C D T I L A V G V P C S S L F K T
 
AT4G00180.1     V T V R C G H C S N L L S V T V S M R A L L L P S - - - - V S N - - - L G H S F L P P P P P - - - - - - - - - - P P P P
Os008985_Os02t0    V T V R C G H C A N L L S - - V N L R G L L L P A P A P A P A N Q L H F G P S L L S P T S P H G L L D E V - A F Q T P S
Os018243_Os04t0    V T V R C G H C A N L L S - - V N L R G L L L P A - A A S T A N Q L P F G Q A L L S P T S P H G L L D E V P S F Q A P A
 
AT4G00180.1     N L L E E M R S G G Q N I N M N M M M S - H H A S A H H P N E H L V M A T R N G R S V D H L Q E M P R P P P - - A N R P
Os008985_Os02t0    L L M E Q A A S A - - - - S L S S I T G R S S S S C A S N A P A M Q M P P A - - K P V Q Q E P E L P K N A P A S A N R P
Os018243_Os04t0    S L M T E Q A S P - - - - N V S S I T S - S N S S C A N N A P A T S M A S A A N K A T Q R E P Q Q P K N A P - S A N R T
 
AT4G00180.1     P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M A D H P P T K
Os008985_Os02t0    P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D Q - G F K
Os018243_Os04t0    S E K R Q R V P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D Q - G L K
 
AT4G00180.1     K A N V R Q Q E G E - D G M M G R E G F Y G - - - - - - - - - S A A N V G V A H N
Os008985_Os02t0    K T - F K P Q D G S - E D I L L K D S L Y A A A A A A A A - - A A A N M G V T P F
Os018243_Os04t0    K T G I Q S Q D G A G E C M L F K D G L Y A A A A A A A A A T A A S S M G V T P F
 
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