fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029682 not found in 431aa AT4G00180.1 not_1st 0.468030690 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00180.1     -----------MSSMSMSSSSAPAF--------------PPDHFSSTDQLCYVHCSFCDT
Sb029682_Sorbi1 AAQARRSTGSFASFGAMMSSVPETFNLDQQHLVVQQQQPPP---AEQEQICYVHCSYCDT
                            *  :* ** . :*              **   :. :*:******:***

AT4G00180.1     VLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPP------PPPP
Sb029682_Sorbi1 ILAVGVPCSSLFQTVTVRCGHCSNLL--YVNLRALLLPAAANQ----LPPFGGQALLSPT
                :***.** ****:*************   *.:******:.:*     ***       .*.

AT4G00180.1     PPPNLL--EEMRSGGQNINMNMMMSHHASAHHPNEHLVMATR------NGRSVDHLQEMP
Sb029682_Sorbi1 SPHGLLDAETMSS------FQAPRSLQPSTDPPSACVSTITSINNTCGGGNSASAMSSMA
                .* .**  * * *      ::   * :.*:. *.  :   *       .*.*.. :..*.

AT4G00180.1     RPPPA----------------NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFS
Sb029682_Sorbi1 PPPPAKPALLEPQLPKSAASGNKTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFS
                 ****                *:..***************:*******.****:******

AT4G00180.1     AAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYGSAANVGVAHN-----
Sb029682_Sorbi1 AAAKNWAHFPHIHFGLMPDQ-GLKKNPMQNQEGAECMLFKDGLYAAAAAAAAAAAAATAA
                *****************.*:   **  :::*** : *: ::*:*.:** ...*       

AT4G00180.1     --------
Sb029682_Sorbi1 SGMGISPF
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     - - - - - - - - - - - M S S M S M S S S S A P A F - - - - - - - - - - - - - - P P D H F S S T D Q L C Y V H C S F C D T
Sb029682_Sorbi1    A A Q A R R S T G S F A S F G A M M S S V P E T F N L D Q Q H L V V Q Q Q Q P P P - - - A E Q E Q I C Y V H C S Y C D T
 
AT4G00180.1     V L A V S V P P S S L F K T V T V R C G H C S N L L S V T V S M R A L L L P S V S N L G H S F L P P - - - - - - P P P P
Sb029682_Sorbi1    I L A V G V P C S S L F Q T V T V R C G H C S N L L - - Y V N L R A L L L P A A A N Q - - - - L P P F G G Q A L L S P T
 
AT4G00180.1     P P P N L L - - E E M R S G G Q N I N M N M M M S H H A S A H H P N E H L V M A T R - - - - - - N G R S V D H L Q E M P
Sb029682_Sorbi1    S P H G L L D A E T M S S - - - - - - F Q A P R S L Q P S T D P P S A C V S T I T S I N N T C G G G N S A S A M S S M A
 
AT4G00180.1     R P P P A - - - - - - - - - - - - - - - - N R P P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S
Sb029682_Sorbi1    P P P P A K P A L L E P Q L P K S A A S G N K T S E K R Q R V P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S
 
AT4G00180.1     A A A K N W A H F P H I H F G L M A D H P P T K K A N V R Q Q E G E D G M M G R E G F Y G S A A N V G V A H N - - - - -
Sb029682_Sorbi1    A A A K N W A H F P H I H F G L M P D Q - G L K K N P M Q N Q E G A E C M L F K D G L Y A A A A A A A A A A A A A T A A
 
AT4G00180.1     - - - - - - - -
Sb029682_Sorbi1    S G M G I S P F
 
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