fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027997 not found in 453aa AT4G00180.1 1st_1st 0.503836317 Ia
Sb029682 not found in 431aa AT4G00180.1 not_1st 0.468030690 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00180.1     --------------------------MS-----------------------SMSMSSSSA
Sb029682_Sorbi1 AAQAR---------------RSTGSFAS--------FGA------------MMSSVPET-
Sb027997_Sorbi1 PDRARRRVLDDDSSLHRSSDRSIFSTASAPQVDQVVVGASCYISVLLGDRIMMSSSSSSS
                                           *                        **  ..: 

AT4G00180.1     PAFPPD--HFS---------STDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNL
Sb029682_Sorbi1 --FNLDQQHLVVQQQQPPPAEQEQICYVHCSYCDTILAVGVPCSSLFQTVTVRCGHCSNL
Sb027997_Sorbi1 AAFPLD--HLA-------PSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL
                  *  *  *:            :*:*****. ***:***.** ****:*********:**

AT4G00180.1     LSVTVSMRALLLPSVS---------NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMM
Sb029682_Sorbi1 LY--VNLRALLLPAAANQLPPFG----GQALL---SPTSPHGLLDAETMS--SFQAPRSL
Sb027997_Sorbi1 LS--VNLRGLLLPPAA---PPANHLNFGHSLL---SPTSPHGLLDELAL-----QAPSLL
                *   *.:*.****..:           *:::*   .*..* .**:         :    :

AT4G00180.1     SHHASAHHPNEHLVMAT------RNGRSVDHLQEMPRP-PPA-----------------N
Sb029682_Sorbi1 --QPSTDPPSACVSTITSINNTCGGGNSASAMSSMAPP-PPAKPALLEPQLPKSAA-SGN
Sb027997_Sorbi1 MEQASANLSS---STMT------GGSNSSCASNLPAGPMPAAKPVQQEPELPKTTAPSVN
                  :.*:. ..      *       ...*    .  . * *.*                 *

AT4G00180.1     RPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPP
Sb029682_Sorbi1 KTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQ-G
Sb027997_Sorbi1 RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQ-G
                :..***************:*******.****:***********************.*:  

AT4G00180.1     TKKANVRQQEGEDGMMGREGFYGSAA-------------NVGVAHN
Sb029682_Sorbi1 LKKNPMQNQEGAECMLFKDGLYAAAAAAAAAAAAATAASGMGISPF
Sb027997_Sorbi1 LKKT-FKTQDGAEDMLLKDGLYAAAAAAAAA--------NMGITPF
                 **  .: *:* : *: ::*:*.:**             .:*::
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     - - - - - - - - - - - - - - - - - - - - - - - - - - M S - - - - - - - - - - - - - - - - - - - - - - - S M S M S S S S A
Sb029682_Sorbi1    A A Q A R - - - - - - - - - - - - - - - R S T G S F A S - - - - - - - - F G A - - - - - - - - - - - - M M S S V P E T -
Sb027997_Sorbi1    P D R A R R R V L D D D S S L H R S S D R S I F S T A S A P Q V D Q V V V G A S C Y I S V L L G D R I M M S S S S S S S
 
AT4G00180.1     P A F P P D - - H F S - - - - - - - - - S T D Q L C Y V H C S F C D T V L A V S V P P S S L F K T V T V R C G H C S N L
Sb029682_Sorbi1    - - F N L D Q Q H L V V Q Q Q Q P P P A E Q E Q I C Y V H C S Y C D T I L A V G V P C S S L F Q T V T V R C G H C S N L
Sb027997_Sorbi1    A A F P L D - - H L A - - - - - - - P S P T E Q L C Y V H C N C C D T I L A V G V P C S S L F K T V T V R C G H C A N L
 
AT4G00180.1     L S V T V S M R A L L L P S V S - - - - - - - - - N L G H S F L P P P P P P P P P N L L E E M R S G G Q N I N M N M M M
Sb029682_Sorbi1    L Y - - V N L R A L L L P A A A N Q L P P F G - - - - G Q A L L - - - S P T S P H G L L D A E T M S - - S F Q A P R S L
Sb027997_Sorbi1    L S - - V N L R G L L L P P A A - - - P P A N H L N F G H S L L - - - S P T S P H G L L D E L A L - - - - - Q A P S L L
 
AT4G00180.1     S H H A S A H H P N E H L V M A T - - - - - - R N G R S V D H L Q E M P R P - P P A - - - - - - - - - - - - - - - - - N
Sb029682_Sorbi1    - - Q P S T D P P S A C V S T I T S I N N T C G G G N S A S A M S S M A P P - P P A K P A L L E P Q L P K S A A - S G N
Sb027997_Sorbi1    M E Q A S A N L S S - - - S T M T - - - - - - G G S N S S C A S N L P A G P M P A A K P V Q Q E P E L P K T T A P S V N
 
AT4G00180.1     R P P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M A D H P P
Sb029682_Sorbi1    K T S E K R Q R V P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D Q - G
Sb027997_Sorbi1    R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D Q - G
 
AT4G00180.1     T K K A N V R Q Q E G E D G M M G R E G F Y G S A A - - - - - - - - - - - - - N V G V A H N
Sb029682_Sorbi1    L K K N P M Q N Q E G A E C M L F K D G L Y A A A A A A A A A A A A A T A A S G M G I S P F
Sb027997_Sorbi1    L K K T - F K T Q D G A E D M L L K D G L Y A A A A A A A A A - - - - - - - - N M G I T P F
 
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