fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001387 not found in 215aa AT2G45190.1 1st_not 0.598465473 II
Gm006033 not found in 216aa AT2G45190.1 not_not 0.585677749 III
Gm011376 not found in 214aa AT2G45190.1 not_not 0.534526854 III
Gm047022 not found in 215aa AT2G45190.1 not_not 0.534526854 III
Gm034118 not found in 181aa AT1G08465.1 not_not 0.406649616 III
Gm037785 not found in 181aa AT1G08465.1 not_not 0.404092071 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00180.1     MSSMSMSSSSAPAFPPD--HFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCS
gm011376_Glyma0 -----MSSSST-TLSLD--HLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCT
gm034118_Glyma1 -------------MSMD---MMATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCA
gm001387_Glyma0 -----MSSSST-SFSPD-QHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCT
gm047022_Glyma1 -----MSSSSS-TLSLD--HLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCT
gm037785_Glyma1 -------------MSMD---MMATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCA
gm006033_Glyma0 -----MSSSST-SFSPDQQHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKNVTVRCGHCT
                             :. *   : .::::*****.:*:*.****** :**:. ********:

AT4G00180.1     NLLSVTVSMRALL--LPSVS--NLGHSFLPPPPPPPPPNLLEEMRS-GGQNINMNMMMSH
gm011376_Glyma0 NLLP--VNMRGLL--MPSPTQFHLGHSFFSP-----SHNLLEEIPN-PSPNFLMNQT---
gm034118_Glyma1 NLLT--VNMGASLQTFPSQDTTQLQRQHLSV----------QEACS--------------
gm001387_Glyma0 NLLS--VNMRGLL--LPSANQLHLGHSFFTP------QNLLEEIRNAPSTNMMMNQ----
gm047022_Glyma1 NLLP--VNMRGLL--MPSPTQFHLGHSFFSP-----SHNLLEEIPN-PTPNFLMNQT---
gm037785_Glyma1 NLLT--VNMGASLQTFPSQDTTQLQRQHLSV----------QEACS--------------
gm006033_Glyma0 NLLS--VNMRGLL--LPSANQLHLGHTFFTP------QNLMEEIRNAPSTNIMMNQ----
                ***.  *.* . *  :**    :* : .:.           :*  .              

AT4G00180.1     HASAHHPNEHLVMAT-RNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIK
gm011376_Glyma0 --NLSASNE-FSMPA-RIAA-----DELPR-PIMNRPPEKRQRVPSAYNRFIKDEIQRIK
gm034118_Glyma1 -KELGSSSKCKSFET------VDH-EQQPRIPPI-RPPEKRQRVPSAYNRFIKEEIQRIK
gm001387_Glyma0 ---LPNPND-LVMSTMRGGP-----EETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIK
gm047022_Glyma1 --NFSASHE-FSMPA-RTAA-----DELPRPPITNRPPEKRQRVPSAYNRFIKDEIQRIK
gm037785_Glyma1 -KELGSSSKCKTFET------VDH-DQQPRIPPI-RPPEKRQRVPSAYNRFIKEEIQRIK
gm006033_Glyma0 ---LPNPND-LVMSTMRGGP-----EETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIK
                      . .   : :          :: *: *   ******************:******

AT4G00180.1     AGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYGSA
gm011376_Glyma0 SVNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QTVKKTNVCQQEGEEVLM-KDGFYAS-
gm034118_Glyma1 ASNPDISHREAFSTAAKNWAHFPHIHFGLKLD--GNKQAKLDQGDGTQK---SNGFY---
gm001387_Glyma0 AGNPDISHREAFSAAAKNWAHFPHIHFGLMPDNQPVKKANV-RQEAEDVLM-KDGFFAP-
gm047022_Glyma1 SVNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QTVKKTNVCQQDGEEVLM-KDGFYAS-
gm037785_Glyma1 ASNPDISHREAFSTAAKNWAHFPHIHFGLKLD--GNKQAKLDQGDGTQK---SNGFY---
gm006033_Glyma0 AGNPDISHREAFSAAAKNWAHFPHIHFGLMPDNQPVKKANV-RQEAEDVLM-KDGFFAP-
                : ****:******:***************  *    *:::: : :. :     :**:   

AT4G00180.1     ANVGVAHN
gm011376_Glyma0 ANVGVSPY
gm034118_Glyma1 --------
gm001387_Glyma0 ANVGVSPY
gm047022_Glyma1 ANVGVSPY
gm037785_Glyma1 --------
gm006033_Glyma0 ANVGVSPY
BoxShade v3.31 C (beta, 970507) Output
AT4G00180.1     M S S M S M S S S S A P A F P P D - - H F S S T D Q L C Y V H C S F C D T V L A V S V P P S S L F K T V T V R C G H C S
gm011376_Glyma0    - - - - - M S S S S T - T L S L D - - H L P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G H C T
gm034118_Glyma1    - - - - - - - - - - - - - M S M D - - - M M A T E R V C Y V H C N F C N T T L A V S V P C S S L L T I V T V R C G H C A
gm001387_Glyma0    - - - - - M S S S S T - S F S P D - Q H L S P S D Q L C Y V H C N F C D T V L A V S V P C T S L F K T V T V R C G H C T
gm047022_Glyma1    - - - - - M S S S S S - T L S L D - - H L P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G H C T
gm037785_Glyma1    - - - - - - - - - - - - - M S M D - - - M M A T E R V C Y V H C N F C N T T L A V S V P C S S L L T I V T V R C G H C A
gm006033_Glyma0    - - - - - M S S S S T - S F S P D Q Q H L S P S D Q L C Y V H C N F C D T V L A V S V P C T S L F K N V T V R C G H C T
 
AT4G00180.1     N L L S V T V S M R A L L - - L P S V S - - N L G H S F L P P P P P P P P P N L L E E M R S - G G Q N I N M N M M M S H
gm011376_Glyma0    N L L P - - V N M R G L L - - M P S P T Q F H L G H S F F S P - - - - - S H N L L E E I P N - P S P N F L M N Q T - - -
gm034118_Glyma1    N L L T - - V N M G A S L Q T F P S Q D T T Q L Q R Q H L S V - - - - - - - - - - Q E A C S - - - - - - - - - - - - - -
gm001387_Glyma0    N L L S - - V N M R G L L - - L P S A N Q L H L G H S F F T P - - - - - - Q N L L E E I R N A P S T N M M M N Q - - - -
gm047022_Glyma1    N L L P - - V N M R G L L - - M P S P T Q F H L G H S F F S P - - - - - S H N L L E E I P N - P T P N F L M N Q T - - -
gm037785_Glyma1    N L L T - - V N M G A S L Q T F P S Q D T T Q L Q R Q H L S V - - - - - - - - - - Q E A C S - - - - - - - - - - - - - -
gm006033_Glyma0    N L L S - - V N M R G L L - - L P S A N Q L H L G H T F F T P - - - - - - Q N L M E E I R N A P S T N I M M N Q - - - -
 
AT4G00180.1     H A S A H H P N E H L V M A T - R N G R S V D H L Q E M P R P P P A N R P P E K R Q R V P S A Y N R F I K E E I Q R I K
gm011376_Glyma0    - - N L S A S N E - F S M P A - R I A A - - - - - D E L P R - P I M N R P P E K R Q R V P S A Y N R F I K D E I Q R I K
gm034118_Glyma1    - K E L G S S S K C K S F E T - - - - - - V D H - E Q Q P R I P P I - R P P E K R Q R V P S A Y N R F I K E E I Q R I K
gm001387_Glyma0    - - - L P N P N D - L V M S T M R G G P - - - - - E E T P K P P S A N R P P E K R Q R V P S A Y N R F I K D E I Q R I K
gm047022_Glyma1    - - N F S A S H E - F S M P A - R T A A - - - - - D E L P R P P I T N R P P E K R Q R V P S A Y N R F I K D E I Q R I K
gm037785_Glyma1    - K E L G S S S K C K T F E T - - - - - - V D H - D Q Q P R I P P I - R P P E K R Q R V P S A Y N R F I K E E I Q R I K
gm006033_Glyma0    - - - L P N P N D - L V M S T M R G G P - - - - - E E T P K P P S A N R P P E K R Q R V P S A Y N R F I K D E I Q R I K
 
AT4G00180.1     A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M A D H P P T K K A N V R Q Q E G E D G M M G R E G F Y G S A
gm011376_Glyma0    S V N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D - Q T V K K T N V C Q Q E G E E V L M - K D G F Y A S -
gm034118_Glyma1    A S N P D I S H R E A F S T A A K N W A H F P H I H F G L K L D - - G N K Q A K L D Q G D G T Q K - - - S N G F Y - - -
gm001387_Glyma0    A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D N Q P V K K A N V - R Q E A E D V L M - K D G F F A P -
gm047022_Glyma1    S V N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D - Q T V K K T N V C Q Q D G E E V L M - K D G F Y A S -
gm037785_Glyma1    A S N P D I S H R E A F S T A A K N W A H F P H I H F G L K L D - - G N K Q A K L D Q G D G T Q K - - - S N G F Y - - -
gm006033_Glyma0    A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D N Q P V K K A N V - R Q E A E D V L M - K D G F F A P -
 
AT4G00180.1     A N V G V A H N
gm011376_Glyma0    A N V G V S P Y
gm034118_Glyma1    - - - - - - - -
gm001387_Glyma0    A N V G V S P Y
gm047022_Glyma1    A N V G V S P Y
gm037785_Glyma1    - - - - - - - -
gm006033_Glyma0    A N V G V S P Y
 
0