fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047003 not found in 331aa AT4G12080.1 not_not 0.40625 III
Gm047004 not found in 327aa AT4G12080.1 not_not 0.40625 III
Gm011353 not found in 327aa AT4G12080.1 not_not 0.404296875 III
Gm045330 not found in 348aa AT5G62260.1 not_not 0.404296875 III
Pt016418 not found in 324aa AT4G12080.1 not_not 0.458984375 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00200.1     METSDRISPGGG-IGAEVPSAYHMA--------PRPSDSPA------NQFMGL--SLPPM
gm047003_Glyma1 METSGGVSGGVTLVGSDAPSDYHVA--------PR-TDNPAPASGSTTQIPATAGSVPPS
pt016418_POPTR_ MEGREGLSSGVTVIGAEAPSTYHMA--------PR-TENPG-------QIVV---SPPAV
gm011353_Glyma0 MEASGGVSSGVTVVGSDAPSDYHVA--------PR-TDNPAPASGSTTQIPATAGSALSP
gm045330_Glyma1 MEEREIFSSGHAVNLLEAPHSFHVALNSVQFSGPT-VETPAPAP---APAPAPAPAPVPV
gm047004_Glyma1 METSGGVSGGVTLVGSDAPSDYHVA--------PR-TDNPAPASGSTTQIPATAGSVPPS
                **    .* *      :.*  :*:*        *   :.*.              :  . 

AT4G00200.1     EAPMPSSGEASG------KKRRGRPRKYEANGA------PLP-SSSVPLVKK-----RVR
gm047003_Glyma1 PHPPHTAAMEAYPAKMPAKKKRGRPRKYAPDGSVTMALSPKPISSSAPLPPVIDFSSEKR
pt016418_POPTR_ EVPPVGAGLIGGTAE---KKKRGRPRKYGPDGAVARALSPMPISASAPHTGG-DYSAGKP
gm011353_Glyma0 SHPPHTAAMEAYPATMPAKKKRGRPRKYAPDGSVTMALSPKPISSSAPLPPVIDFSSEKR
gm045330_Glyma1 IAPVMNSGSTEG------KKKRGRPRKYGPDGKV--ALSPMPISASIPFTG--DFSAWKR
gm047004_Glyma1 PHPPHTAAMEAYPAKMPAKKKRGRPRKYAPDGSVTMALSPKPISSSAPLPPVIDFSSEKR
                  *   :.          **:******* .:*       * * *:* *            

AT4G00200.1     GKLN-GFDMKKMHKTIGFHSSGERFGVGGGVGGGVGSNFTPHVITVNTGEDITMRIISFS
gm047003_Glyma1 GKIKPTSSVSK--AKFELENLGE------WVACSVGANFTPHIITVNSGEDVTMKVISFS
pt016418_POPTR_ GKVWPGSYEKKKYKKMGMENLGE------WAANSVGTNFTPHVITVNAGEDVTMKVISFS
gm011353_Glyma0 GKIKPASSVSK--AKFELENLGE------WVACSVGANFTPHIITVNSGEDVTMKVISFS
gm045330_Glyma1 GRGKPLESIKKTFKFYEAGGAGS----GDGIAYSVGANFTPHILTVNDGEDVTMKIMSFS
gm047004_Glyma1 GKIKPTSSVSK--AKFELENLGE------WVACSVGANFTPHIITVNSGEDVTMKVISFS
                *:       .*        . *.        . .**:*****::*** ***:**:::***

AT4G00200.1     QQGPRAICILSANGVISNVTLRQPDSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGG
gm047003_Glyma1 QQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGG
pt016418_POPTR_ QQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTEIQGTRSRSGG
gm011353_Glyma0 QQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGG
gm045330_Glyma1 QQGYRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGG
gm047004_Glyma1 QQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGG
                *** **********.**.****** *.******************:: .*   ::.****

AT4G00200.1     MSVSLAGPDGRVVGGGVAGLLIAATPIQVVVGSFITSDQQDHQKPRKQRVEHAPAAVMSV
gm047003_Glyma1 MSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHE-QKPRKQRHEVI-TSVIPA
pt016418_POPTR_ MSVSLASPDGRVVGGSVAGLLVAASPVQVVVGSFLPGNHQE-QKPKKPKIDSIPATFAPA
gm011353_Glyma0 MSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHE-QKPRKQKHEVI-SSVTPA
gm045330_Glyma1 MSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEQQKPKKPRVEHIISMAAPM
gm047004_Glyma1 MSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHE-QKPRKQRHEVI-TSVIPA
                **:***.*****:**.:****:** *:****.**:...: : ***:* : :   :   . 

AT4G00200.1     PPPPSPPPPAASV-FSPTNPDREQPPSSFGISS-WTNGQD--MPRNSATDINISLPVD--
gm047003_Glyma1 AVVPISTLDPVPI-LSA--------ASSIRNDN-WSAMPA--EAKNKPADINVSLPAGFV
pt016418_POPTR_ PAIPASIAEREE---SAGTPQGQQNSSPFQREN-WATMHSMQDVRNSGTDINISLPEG--
gm011353_Glyma0 AVVPISTLDPVSI-LSA--------ASSIRNDN-WSAMPA--EAKDKPADINVSLPAG--
gm045330_Glyma1 HVNPTSAAEEIRIGLGGVKPI--MTPAAFQVDHIFGNGQS---SGNSASDDSASFPEN--
gm047004_Glyma1 AVVPISTLDPVPI-LSA--------ASSIRNDN-WSAMPA--EAKNKPADINVSLPAG--
                   * .         .         .:.:  .  :          :. :* . *:* .  

AT4G00200.1     --------------
gm047003_Glyma1 FM------------
pt016418_POPTR_ --------------
gm011353_Glyma0 --------------
gm045330_Glyma1 -ESNPSHADAGVAC
gm047004_Glyma1 --------------
BoxShade v3.31 C (beta, 970507) Output
AT4G00200.1     M E T S D R I S P G G G - I G A E V P S A Y H M A - - - - - - - - P R P S D S P A - - - - - - N Q F M G L - - S L P P M
gm047003_Glyma1    M E T S G G V S G G V T L V G S D A P S D Y H V A - - - - - - - - P R - T D N P A P A S G S T T Q I P A T A G S V P P S
pt016418_POPTR_    M E G R E G L S S G V T V I G A E A P S T Y H M A - - - - - - - - P R - T E N P G - - - - - - - Q I V V - - - S P P A V
gm011353_Glyma0    M E A S G G V S S G V T V V G S D A P S D Y H V A - - - - - - - - P R - T D N P A P A S G S T T Q I P A T A G S A L S P
gm045330_Glyma1    M E E R E I F S S G H A V N L L E A P H S F H V A L N S V Q F S G P T - V E T P A P A P - - - A P A P A P A P A P V P V
gm047004_Glyma1    M E T S G G V S G G V T L V G S D A P S D Y H V A - - - - - - - - P R - T D N P A P A S G S T T Q I P A T A G S V P P S
 
AT4G00200.1     E A P M P S S G E A S G - - - - - - K K R R G R P R K Y E A N G A - - - - - - P L P - S S S V P L V K K - - - - - R V R
gm047003_Glyma1    P H P P H T A A M E A Y P A K M P A K K K R G R P R K Y A P D G S V T M A L S P K P I S S S A P L P P V I D F S S E K R
pt016418_POPTR_    E V P P V G A G L I G G T A E - - - K K K R G R P R K Y G P D G A V A R A L S P M P I S A S A P H T G G - D Y S A G K P
gm011353_Glyma0    S H P P H T A A M E A Y P A T M P A K K K R G R P R K Y A P D G S V T M A L S P K P I S S S A P L P P V I D F S S E K R
gm045330_Glyma1    I A P V M N S G S T E G - - - - - - K K K R G R P R K Y G P D G K V - - A L S P M P I S A S I P F T G - - D F S A W K R
gm047004_Glyma1    P H P P H T A A M E A Y P A K M P A K K K R G R P R K Y A P D G S V T M A L S P K P I S S S A P L P P V I D F S S E K R
 
AT4G00200.1     G K L N - G F D M K K M H K T I G F H S S G E R F G V G G G V G G G V G S N F T P H V I T V N T G E D I T M R I I S F S
gm047003_Glyma1    G K I K P T S S V S K - - A K F E L E N L G E - - - - - - W V A C S V G A N F T P H I I T V N S G E D V T M K V I S F S
pt016418_POPTR_    G K V W P G S Y E K K K Y K K M G M E N L G E - - - - - - W A A N S V G T N F T P H V I T V N A G E D V T M K V I S F S
gm011353_Glyma0    G K I K P A S S V S K - - A K F E L E N L G E - - - - - - W V A C S V G A N F T P H I I T V N S G E D V T M K V I S F S
gm045330_Glyma1    G R G K P L E S I K K T F K F Y E A G G A G S - - - - G D G I A Y S V G A N F T P H I L T V N D G E D V T M K I M S F S
gm047004_Glyma1    G K I K P T S S V S K - - A K F E L E N L G E - - - - - - W V A C S V G A N F T P H I I T V N S G E D V T M K V I S F S
 
AT4G00200.1     Q Q G P R A I C I L S A N G V I S N V T L R Q P D S C G G T L T Y E G R F E I L S L S G S F M E T E N Q G S K G R S G G
gm047003_Glyma1    Q Q G P R A I C I L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M P S E S G G T R S R S G G
pt016418_POPTR_    Q Q G P R A I C I L S A N G V I S N V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M P T E I Q G T R S R S G G
gm011353_Glyma0    Q Q G P R A I C I L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M P N E S G G T R S R S G G
gm045330_Glyma1    Q Q G Y R A I C I L S A N G T I S N V T L R Q P T S S G G T L T Y E G R F E I L S L S G S Y I T T E N G L T K S R S G G
gm047004_Glyma1    Q Q G P R A I C I L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M P S E S G G T R S R S G G
 
AT4G00200.1     M S V S L A G P D G R V V G G G V A G L L I A A T P I Q V V V G S F I T S D Q Q D H Q K P R K Q R V E H A P A A V M S V
gm047003_Glyma1    M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V G S F L A G N Q H E - Q K P R K Q R H E V I - T S V I P A
pt016418_POPTR_    M S V S L A S P D G R V V G G S V A G L L V A A S P V Q V V V G S F L P G N H Q E - Q K P K K P K I D S I P A T F A P A
gm011353_Glyma0    M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V G S F L A G N Q H E - Q K P R K Q K H E V I - S S V T P A
gm045330_Glyma1    M S I S L A G P D G R V M G G G L A G L L V A A G P V Q V V V A S F L P G H Q L E Q Q K P K K P R V E H I I S M A A P M
gm047004_Glyma1    M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V G S F L A G N Q H E - Q K P R K Q R H E V I - T S V I P A
 
AT4G00200.1     P P P P S P P P P A A S V - F S P T N P D R E Q P P S S F G I S S - W T N G Q D - - M P R N S A T D I N I S L P V D - -
gm047003_Glyma1    A V V P I S T L D P V P I - L S A - - - - - - - - A S S I R N D N - W S A M P A - - E A K N K P A D I N V S L P A G F V
pt016418_POPTR_    P A I P A S I A E R E E - - - S A G T P Q G Q Q N S S P F Q R E N - W A T M H S M Q D V R N S G T D I N I S L P E G - -
gm011353_Glyma0    A V V P I S T L D P V S I - L S A - - - - - - - - A S S I R N D N - W S A M P A - - E A K D K P A D I N V S L P A G - -
gm045330_Glyma1    H V N P T S A A E E I R I G L G G V K P I - - M T P A A F Q V D H I F G N G Q S - - - S G N S A S D D S A S F P E N - -
gm047004_Glyma1    A V V P I S T L D P V P I - L S A - - - - - - - - A S S I R N D N - W S A M P A - - E A K N K P A D I N V S L P A G - -
 
AT4G00200.1     - - - - - - - - - - - - - -
gm047003_Glyma1    F M - - - - - - - - - - - -
pt016418_POPTR_    - - - - - - - - - - - - - -
gm011353_Glyma0    - - - - - - - - - - - - - -
gm045330_Glyma1    - E S N P S H A D A G V A C
gm047004_Glyma1    - - - - - - - - - - - - - -
 
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